Packages

18 packages on Bioconductor, most distinct IPs first

Package	Maintainer	Category	Latest version	Distinct IPs a month	Needs
limma Linear Models for Microarray and Omics DataGordon Smyth	Gordon Smyth	software	10 Aug 2026	45,965	6
lumi BeadArray Specific Methods for Illumina Methylation and Expression MicroarraysLei Huang	Lei Huang	software	28 Apr 2026	2,454	165
limmaGUI GUI for limma Package With Two Color MicroarraysGordon Smyth	Gordon Smyth	software	28 Apr 2026	1,165	11
LBE Estimation of the false discovery rateCyril Dalmasso	Cyril Dalmasso	software	28 Apr 2026	944	3
logicFS Identification of SNP InteractionsHolger Schwender	Holger Schwender	software	28 Apr 2026	878	12
LPE Methods for analyzing microarray data using Local Pooled Error (LPE) methodNitin Jain	Nitin Jain	software	28 Apr 2026	855	1
lapmix Laplace Mixture Model in Microarray Experiments			no date on record	522
lumiHumanAll.db Illumina Human Illumina expression annotation data (chip lumiHumanAll)Bioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	481	43
LMGene LMGene Software for Data Transformation and Identification of Differentially Expressed Genes in Gene Expression Arrays			no date on record	422
lumiMouseAll.db Illumina Mouse Illumina expression annotation data (chip lumiMouseAll)Bioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	341	43
lumiRatAll.db Illumina Rat Illumina expression annotation data (chip lumiRatAll)Bioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	304	43
LAPOINTE.db A package containing metadata for LAPOINTE arraysBioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	302	43
lumiHumanIDMapping Illumina Identifier mapping for HumanGilbert Feng	Gilbert Feng	annotation	no date on record	293	166
lumiRatIDMapping Illumina Identifier mapping for RatGilbert Feng	Gilbert Feng	annotation	no date on record	271	166
ListerEtAlBSseq BS-seq data of H1 and IMR90 cell line excerpted from Lister et al. 2009Mattia Furlan	Mattia Furlan	experiment	5 May 2026	230	159
lumiMouseIDMapping Illumina Identifier mapping for MouseGilbert Feng	Gilbert Feng	annotation	no date on record	219	166
LowMACAAnnotation LowMACAAnnotationStefano de Pretis	Stefano de Pretis	annotation	no date on record	189	0
LymphoSeqDB LymphoSeq annotation databasesDavid Coffey	David Coffey	annotation	no date on record	132	0