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whirl

Log Execution of Scripts

v0.3.2 · Jan 21, 2026 · Apache License (>= 2)

Description

Logging of scripts suitable for clinical trials using 'Quarto' to create nice human readable logs. 'whirl' enables execution of scripts in batch, while simultaneously creating logs for the execution of each script, and providing an overview summary log of the entire batch execution.

Downloads

CRAN

267

Last 30 days

18235th

678

Last 90 days

2.9K

Last year

Trend: +59.9% (30d vs prior 30d)

r2u CRAN

1

Last 30 days

25

Last 90 days

111

Last year

Trend: -88.9% (30d vs prior 30d)

autoCRAN

12

Last 7 days

22

Last 30 days

2

All-time

autoCRAN-only: this name is served only by autoCRAN, so the count is exact.

conda-forge CRAN

36

Last 30 days

151

Last 90 days

897

Last year

Trend: -51.4% (30d vs prior 30d)

CRAN Check Status

13 OK
Show all 13 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 12 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Apr 25, 2026
ERROR 13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Mar 10, 2026
ERROR r-oldrel-windows-x86_64

tests

Running 'testthat.R' [412s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > # This file is part of the standard setup for testthat.
  > # It is recommended that you do not modify it.
  > #
  > # Where should you do additional tes
...[truncated]...
st-mdformats.R:29:3'): pandoc works ─────────────────────────────
  Expected `all(...)` to be TRUE.
  Differences:
  `actual`:   FALSE
  `expected`: TRUE 
  
  
  [ FAIL 1 | WARN 0 | SKIP 16 | PASS 150 ]
  Error:
  ! Test failures.
  Execution halted

Code intelligence has not been computed for this package yet.

Code

Structure

Lines of code

40,700

Files

116

Compiled share

0%

Has compiled src

No

Language breakdown

R 2,925 (7.2%)Tests 37,077 (91.1%)Docs 527 (1.3%)Vignettes 171 (0.4%)

API

Exported functions

7

Internal functions

73

Recent export changes

v0.3.0+2 use_biocompute, write_biocompute
v0.2.0+5 log_delete, log_read, log_write +2 more

Testing & CI

Has tests

Yes

Test-to-code ratio

12.68

testthat edition

3

CI present

No

CI type

[]

PR gated

No

Docs

Return-value doc rate

40%

\dontrun example ratio

0%

Roxygen coverage

100%

Has pkgdown

No

NEWS present

Yes

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

11.1%

Unsafe pattern score

0

Dep constraint coverage

15%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

4.1

System requirements

1

C++ standard

License

Apache License (>= 2)

License flags

SPDX valid, OSI approved

History

Versions

4

First release

2025-04-15

Latest release

2026-01-21

Avg cadence

84 days

Cold removal rate

Dep drift

5

LOC over versions

v0.2.0: 39,031 LOCv0.3.0: 9,465 LOCv0.3.1: 46,647 LOCv0.3.2: 40,700 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/cran-code-metrics.

Reverse Dependencies (3)

Dependency Network

Dependencies Reverse dependencies callr cli dplyr jsonlite kableExtra knitr purrr quarto R6 renv reticulate rlang sessioninfo stringr tibble +4 more dependencies connector connector.databricks connector.sharepoint whirl

Version History

5 tracked
new 0.3.2 Mar 10, 2026
updated 0.3.2 ← 0.3.1 diff Jan 20, 2026
updated 0.3.1 ← 0.3.0 diff Aug 24, 2025
updated 0.3.0 ← 0.2.0 diff Jul 7, 2025
new 0.2.0 Apr 14, 2025