vagam
Variational Approximations for Generalized Additive Models
v1.1
·
Dec 6, 2019
·
GPL-3
Description
Fits generalized additive models (GAMs) using a variational approximations (VA) framework. In brief, the VA framework provides a fully or at least closed to fully tractable lower bound approximation to the marginal likelihood of a GAM when it is parameterized as a mixed model (using penalized splines, say). In doing so, the VA framework aims offers both the stability and natural inference tools available in the mixed model approach to GAMs, while achieving computation times comparable to that of using the penalized likelihood approach to GAMs. See Hui et al. (2018) <doi:10.1080/01621459.2018.1518235>.
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| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | NOTE |
| r-devel-linux-x86_64-debian-gcc | NOTE |
| r-devel-linux-x86_64-fedora-clang | NOTE |
| r-devel-linux-x86_64-fedora-gcc | NOTE |
| r-devel-macos-arm64 | NOTE |
| r-devel-windows-x86_64 | NOTE |
| r-oldrel-macos-arm64 | NOTE |
| r-oldrel-macos-x86_64 | NOTE |
| r-oldrel-windows-x86_64 | NOTE |
| r-patched-linux-x86_64 | NOTE |
| r-release-linux-x86_64 | NOTE |
| r-release-macos-arm64 | NOTE |
| r-release-macos-x86_64 | NOTE |
| r-release-windows-x86_64 | NOTE |
Check details (16 non-OK)
NOTE
r-devel-linux-x86_64-debian-clang
CRAN incoming feasibility
Maintainer: ‘Han Lin Shang <hanlin.shang@anu.edu.au>’ Package CITATION file contains call(s) to old-style personList() or as.personList(). Please use c() on person objects instead.
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r-devel-linux-x86_64-debian-gcc
CRAN incoming feasibility
Maintainer: ‘Han Lin Shang <hanlin.shang@anu.edu.au>’ Package CITATION file contains call(s) to old-style personList() or as.personList(). Please use c() on person objects instead.
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checkRd: (-1) summary.vagam.Rd:30: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:31: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:32: Lost braces in \itemize; meant \describe ?
checkRd: (-1) vagam.Rd:33: Lost braces in \itemize; meant \describe ?
checkRd: (-1)
...[truncated]...
braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:67: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:68: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:69: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:70: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:71: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:72: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:73: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:74: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:75: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:76: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:77: Lost braces in \itemize; \value handles \item{}{} directly
NOTE
r-release-linux-x86_64
Rd files
checkRd: (-1) summary.vagam.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:27: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:28: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:29: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:30: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:31: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:32: Lost braces in \itemize; meant \describe ?
checkRd: (-1) vagam.Rd:33: Lost braces in \itemize; meant \describe ?
checkRd: (-1)
...[truncated]...
braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:67: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:68: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:69: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:70: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:71: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:72: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:73: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:74: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:75: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:76: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:77: Lost braces in \itemize; \value handles \item{}{} directly
NOTE
r-release-macos-arm64
Rd files
checkRd: (-1) summary.vagam.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:27: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:28: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:29: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:30: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:31: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:32: Lost braces in \itemize; meant \describe ?
checkRd: (-1) vagam.Rd:33: Lost braces in \itemize; meant \describe ?
checkRd: (-1)
...[truncated]...
braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:67: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:68: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:69: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:70: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:71: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:72: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:73: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:74: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:75: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:76: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:77: Lost braces in \itemize; \value handles \item{}{} directly
NOTE
r-release-macos-x86_64
Rd files
checkRd: (-1) summary.vagam.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:27: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:28: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:29: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:30: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:31: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:32: Lost braces in \itemize; meant \describe ?
checkRd: (-1) vagam.Rd:33: Lost braces in \itemize; meant \describe ?
checkRd: (-1)
...[truncated]...
braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:67: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:68: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:69: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:70: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:71: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:72: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:73: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:74: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:75: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:76: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:77: Lost braces in \itemize; \value handles \item{}{} directly
NOTE
r-release-windows-x86_64
Rd files
checkRd: (-1) summary.vagam.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:27: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:28: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:29: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:30: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:31: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:32: Lost braces in \itemize; meant \describe ?
checkRd: (-1) vagam.Rd:33: Lost braces in \itemize; meant \describe ?
checkRd: (-1)
...[truncated]...
braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:67: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:68: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:69: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:70: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:71: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:72: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:73: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:74: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:75: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:76: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:77: Lost braces in \itemize; \value handles \item{}{} directly
Check History
NOTE 0 OK · 14 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
NOTE
r-devel-linux-x86_64-debian-clang
CRAN incoming feasibility
Maintainer: ‘Han Lin Shang <hanlin.shang@anu.edu.au>’ Package CITATION file contains call(s) to old-style personList() or as.personList(). Please use c() on person objects instead.
NOTE
r-devel-linux-x86_64-debian-gcc
CRAN incoming feasibility
Maintainer: ‘Han Lin Shang <hanlin.shang@anu.edu.au>’ Package CITATION file contains call(s) to old-style personList() or as.personList(). Please use c() on person objects instead.
NOTE
r-devel-linux-x86_64-fedora-clang
Rd files
checkRd: (-1) summary.vagam.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:25: Lost braces in \itemize; \v
...[truncated]...
: (-1) vagam.Rd:75: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:76: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:77: Lost braces in \itemize; \value handles \item{}{} directly
NOTE
r-devel-linux-x86_64-fedora-gcc
Rd files
checkRd: (-1) summary.vagam.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:25: Lost braces in \itemize; \v
...[truncated]...
: (-1) vagam.Rd:75: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:76: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:77: Lost braces in \itemize; \value handles \item{}{} directly
NOTE
r-devel-macos-arm64
Rd files
checkRd: (-1) summary.vagam.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:25: Lost braces in \itemize; \v
...[truncated]...
: (-1) vagam.Rd:75: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:76: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:77: Lost braces in \itemize; \value handles \item{}{} directly
NOTE
r-devel-windows-x86_64
Rd files
checkRd: (-1) summary.vagam.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:25: Lost braces in \itemize; \v
...[truncated]...
: (-1) vagam.Rd:75: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:76: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:77: Lost braces in \itemize; \value handles \item{}{} directly
NOTE
r-patched-linux-x86_64
Rd files
checkRd: (-1) summary.vagam.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:25: Lost braces in \itemize; \v
...[truncated]...
: (-1) vagam.Rd:75: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:76: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:77: Lost braces in \itemize; \value handles \item{}{} directly
NOTE
r-release-linux-x86_64
Rd files
checkRd: (-1) summary.vagam.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:25: Lost braces in \itemize; \v
...[truncated]...
: (-1) vagam.Rd:75: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:76: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:77: Lost braces in \itemize; \value handles \item{}{} directly
NOTE
r-release-macos-arm64
Rd files
checkRd: (-1) summary.vagam.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:25: Lost braces in \itemize; \v
...[truncated]...
: (-1) vagam.Rd:75: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:76: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:77: Lost braces in \itemize; \value handles \item{}{} directly
NOTE
r-release-macos-x86_64
Rd files
checkRd: (-1) summary.vagam.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:25: Lost braces in \itemize; \v
...[truncated]...
: (-1) vagam.Rd:75: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:76: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:77: Lost braces in \itemize; \value handles \item{}{} directly
NOTE
r-release-windows-x86_64
Rd files
checkRd: (-1) summary.vagam.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:25: Lost braces in \itemize; \v
...[truncated]...
: (-1) vagam.Rd:75: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:76: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:77: Lost braces in \itemize; \value handles \item{}{} directly
NOTE
r-oldrel-macos-arm64
Rd files
checkRd: (-1) summary.vagam.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:25: Lost braces in \itemize; \v
...[truncated]...
: (-1) vagam.Rd:75: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:76: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:77: Lost braces in \itemize; \value handles \item{}{} directly
NOTE
r-oldrel-macos-x86_64
Rd files
checkRd: (-1) summary.vagam.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:25: Lost braces in \itemize; \v
...[truncated]...
: (-1) vagam.Rd:75: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:76: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:77: Lost braces in \itemize; \value handles \item{}{} directly
NOTE
r-oldrel-windows-x86_64
Rd files
checkRd: (-1) summary.vagam.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summary.vagam.Rd:25: Lost braces in \itemize; \v
...[truncated]...
: (-1) vagam.Rd:75: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:76: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) vagam.Rd:77: Lost braces in \itemize; \value handles \item{}{} directly