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transform.hazards

Transforms Cumulative Hazards to Parameter Specified by ODE System

v0.1.1 · Jun 6, 2023 · GPL (>= 3)

Description

Targets parameters that solve Ordinary Differential Equations (ODEs) driven by a vector of cumulative hazard functions. The package provides a method for estimating these parameters using an estimator defined by a corresponding Stochastic Differential Equation (SDE) system driven by cumulative hazard estimates. By providing cumulative hazard estimates as input, the package gives estimates of the parameter as output, along with pointwise (co)variances derived from an asymptotic expression. Examples of parameters that can be targeted in this way include the survival function, the restricted mean survival function, cumulative incidence functions, among others; see Ryalen, Stensrud, and Røysland (2018) <doi:10.1093/biomet/asy035>, and further applications in Stensrud, Røysland, and Ryalen (2019) <doi:10.1111/biom.13102> and Ryalen et al. (2021) <doi:10.1093/biostatistics/kxab009>.

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Last 30 days

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618

Last 90 days

2.8K

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r2u CRAN

0

Last 30 days

24

Last 90 days

96

Last year

Trend: -100% (30d vs prior 30d)

autoCRAN

5

Last 7 days

15

Last 30 days

0

All-time

autoCRAN-only: this name is served only by autoCRAN, so the count is exact.

CRAN Check Status

13 OK
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r-devel-linux-x86_64-fedora-gcc OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
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r-patched-linux-x86_64 OK
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r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

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Code

Structure

Lines of code

715

Files

18

Compiled share

0%

Has compiled src

No

Language breakdown

R 78 (10.9%)Docs 162 (22.7%)Vignettes 475 (66.4%)

API

Exported functions

1

Internal functions

0

Recent export changes

v0.1.0+1 pluginEstimate

Testing & CI

Has tests

No

Test-to-code ratio

0.00

testthat edition

CI present

No

CI type

[]

PR gated

No

Docs

Return-value doc rate

100%

\dontrun example ratio

0%

Roxygen coverage

100%

Has pkgdown

No

NEWS present

No

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

Unsafe pattern score

0

Dep constraint coverage

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

System requirements

C++ standard

License

GPL (>= 3)

License flags

SPDX valid, OSI approved

History

Versions

2

First release

2022-12-08

Latest release

2023-06-06

Avg cadence

180 days

Cold removal rate

Dep drift

0

LOC over versions

v0.1.0: 481 LOCv0.1.1: 715 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/cran-code-metrics.

Version History

3 tracked
new 0.1.1 Mar 10, 2026
updated 0.1.1 ← 0.1.0 diff Jun 5, 2023
new 0.1.0 Dec 7, 2022