tmod

Feature Set Enrichment Analysis for Metabolomics and Transcriptomics

v0.50.13 · Mar 31, 2023 · GPL (>= 2.0)

Description

Methods and feature set definitions for feature or gene set enrichment analysis in transcriptional and metabolic profiling data. Package includes tests for enrichment based on ranked lists of features, functions for visualisation and multivariate functional analysis. See Zyla et al (2019) <doi:10.1093/bioinformatics/btz447>.

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r-devel-linux-x86_64-debian-clang	NOTE	164.6s
r-devel-linux-x86_64-debian-gcc	NOTE	113.8s
r-devel-linux-x86_64-fedora-clang	NOTE	246.5s
r-devel-linux-x86_64-fedora-gcc	NOTE	254.3s
r-devel-macos-arm64	NOTE	44s
r-devel-windows-x86_64	NOTE	175s
r-oldrel-macos-arm64	NOTE
r-oldrel-macos-x86_64	NOTE	108s
r-oldrel-windows-x86_64	NOTE	221s
r-patched-linux-x86_64	NOTE	155.1s
r-release-linux-x86_64	NOTE	145.2s
r-release-macos-arm64	NOTE
r-release-macos-x86_64	NOTE	146s
r-release-windows-x86_64	NOTE	174s

Check details (14 non-OK)

NOTE r-devel-linux-x86_64-debian-clang

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Check History

NOTE 0 OK · 14 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

NOTE r-devel-linux-x86_64-debian-clang

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Dependency Network

Version History

new 0.50.13 Mar 10, 2026

updated 0.50.13 ← 0.50.11 diff Mar 30, 2023

updated 0.50.11 ← 0.46.2 diff Sep 25, 2022

updated 0.46.2 ← 0.44 diff Oct 1, 2020

updated 0.44 ← 0.40 diff Jun 17, 2020

updated 0.40 ← 0.36 diff Nov 28, 2018

updated 0.36 ← 0.31 diff Mar 9, 2018

updated 0.31 ← 0.30 diff Sep 7, 2016

updated 0.30 ← 0.27 diff Aug 4, 2016

updated 0.27 ← 0.26 diff Jun 3, 2016

updated 0.26 ← 0.24 diff May 17, 2016

updated 0.24 ← 0.19 diff Feb 25, 2016

new 0.19 Jun 18, 2015

Maintainer

January Weiner

Dependencies

Depends

R (>= 2.10)

Imports

beeswarm tagcloud XML methods plotwidgets RColorBrewer gplots tibble pheatmap ggplot2 tidyr purrr rlang tidyselect ggrepel

Suggests

testthat knitr rmarkdown dplyr pander cowplot

Compilation

No compilation needed

First Published

Jun 18, 2015

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