Description
Implements methods and functions to calibrate time-specific niche models (multi-temporal calibration), letting users execute a strict calibration and selection process of niche models based on ellipsoids, as well as functions to project the potential distribution in the present and in global change scenarios.The 'tenm' package has functions to recover information that may be lost or overlooked while applying a data curation protocol. This curation involves preserving occurrences that may appear spatially redundant (occurring in the same pixel) but originate from different time periods. A novel aspect of this package is that it might reconstruct the fundamental niche more accurately than mono-calibrated approaches. The theoretical background of the package can be found in Peterson et al. (2011)<doi:10.5860/CHOICE.49-6266>.
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CRAN Check Status
Show all 13 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | OK |
| r-devel-linux-x86_64-debian-gcc | OK |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | OK |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | ERROR |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (1 non-OK)
tests
Running ‘testthat.R’ [6s/21s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
>
> library(testthat)
> library(tenm)
>
> test_check("tenm")
*****************************************************************
Here is a list of variables that can summarize your niche
information, according to the threshold of 0.5 :
temperature precip
*****************************************************************
----------------------------------------------------------------
Correlation list:
Variable temperature is strongly correlated with:
temperature
1
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! Interrupting test: tests for tdf2swd, cov_center, inEllipsoid, ellipsoid_omr, ellipsoid_projection, plot_ellipsoid, ellipsoid_omr, ellipsoid_selection, tenm_selection
Execution halted
Check History
ERROR 11 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Apr 27, 2026
tests
Running ‘testthat.R’ [6s/21s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional t ...[truncated]... ─────────────────────────────────────────────────── 100% ! Interrupting test: tests for tdf2swd, cov_center, inEllipsoid, ellipsoid_omr, ellipsoid_projection, plot_ellipsoid, ellipsoid_omr, ellipsoid_selection, tenm_selection Execution halted
OK 12 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Apr 25, 2026
NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
installed package size
installed size is 5.8Mb
sub-directories of 1Mb or more:
extdata 4.9Mb
installed package size
installed size is 5.8Mb
sub-directories of 1Mb or more:
extdata 4.9Mb
Dependency Network
Version History
1 trackedR Observatory began tracking this package on Mar 10, 2026; it first appeared on CRAN Jul 23, 2024. Releases before tracking aren’t shown.