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tcgaViz

Visualization Tool for the Cancer Genome Atlas Program (TCGA)

v1.0.2 · Apr 4, 2023 · GPL-3

Description

Differential analysis of tumor tissue immune cell type abundance based on RNA-seq gene-level expression from The Cancer Genome Atlas (TCGA; <https://pancanatlas.xenahubs.net>) database.

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CRAN Check Status

14 OK
Show all 14 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Dependency Network

Dependencies Reverse dependencies config data.table dplyr DT ggplot2 ggpubr golem magrittr plotly readr reshape2 rlang rstatix scales shiny +5 more dependencies tcgaViz

Version History

new 1.0.2 Mar 10, 2026
updated 1.0.2 ← 1.0.1 diff Apr 3, 2023
updated 1.0.1 ← 1.0.0 diff Jul 4, 2022
new 1.0.0 Jun 27, 2022