Description
Implements stacked elastic net regression (Rauschenberger 2021 <doi:10.1093/bioinformatics/btaa535>). The elastic net generalises ridge and lasso regularisation (Zou 2005 <doi:10.1111/j.1467-9868.2005.00503.x>). Instead of fixing or tuning the mixing parameter alpha, we combine multiple alpha by stacked generalisation (Wolpert 1992 <doi:10.1016/S0893-6080(05)80023-1>).
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Show all 14 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | ERROR |
| r-devel-linux-x86_64-debian-gcc | ERROR |
| r-devel-linux-x86_64-fedora-clang | ERROR |
| r-devel-linux-x86_64-fedora-gcc | ERROR |
| r-devel-macos-arm64 | ERROR |
| r-devel-windows-x86_64 | ERROR |
| r-oldrel-macos-arm64 | OK |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | ERROR |
| r-patched-linux-x86_64 | ERROR |
| r-release-linux-x86_64 | ERROR |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | ERROR |
Check details (20 non-OK)
WARNING
r-devel-linux-x86_64-debian-clang
dependencies in R code
Missing or unexported object: ‘CVXR::solve’
ERROR
r-devel-linux-x86_64-debian-clang
tests
Running ‘testthat.R’ [9s/12s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(starnet)
>
> testthat::test_check(package="starnet",stop_on_warning=FALSE)
Saving _problems/test-92.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 15 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test.R:92:5'): (code run outside of `test_that()`) ──────────────────
Error: 'solve' is not an exported object from 'namespace:CVXR'
Backtrace:
▆
1. └─starnet:::.glm(y = list$y, X = list$X, family = family) at test.R:92:5
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 15 ]
Error:
! Test failures.
Execution halted
WARNING
r-devel-linux-x86_64-debian-gcc
dependencies in R code
Missing or unexported object: ‘CVXR::solve’
ERROR
r-devel-linux-x86_64-debian-gcc
tests
Running ‘testthat.R’ [6s/7s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(starnet)
>
> testthat::test_check(package="starnet",stop_on_warning=FALSE)
Saving _problems/test-92.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 15 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test.R:92:5'): (code run outside of `test_that()`) ──────────────────
Error: 'solve' is not an exported object from 'namespace:CVXR'
Backtrace:
▆
1. └─starnet:::.glm(y = list$y, X = list$X, family = family) at test.R:92:5
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 15 ]
Error:
! Test failures.
Execution halted
WARNING
r-devel-linux-x86_64-fedora-clang
dependencies in R code
Missing or unexported object: ‘CVXR::solve’
ERROR
r-devel-linux-x86_64-fedora-clang
tests
Running ‘testthat.R’ [15s/37s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(starnet)
>
> testthat::test_check(package="starnet",stop_on_warning=FALSE)
Saving _problems/test-92.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 15 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test.R:92:5'): (code run outside of `test_that()`) ──────────────────
Error: 'solve' is not an exported object from 'namespace:CVXR'
Backtrace:
▆
1. └─starnet:::.glm(y = list$y, X = list$X, family = family) at test.R:92:5
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 15 ]
Error:
! Test failures.
Execution halted
WARNING
r-devel-linux-x86_64-fedora-gcc
dependencies in R code
Missing or unexported object: ‘CVXR::solve’
ERROR
r-devel-linux-x86_64-fedora-gcc
tests
Running ‘testthat.R’ [15s/19s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(starnet)
>
> testthat::test_check(package="starnet",stop_on_warning=FALSE)
Saving _problems/test-92.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 15 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test.R:92:5'): (code run outside of `test_that()`) ──────────────────
Error: 'solve' is not an exported object from 'namespace:CVXR'
Backtrace:
▆
1. └─starnet:::.glm(y = list$y, X = list$X, family = family) at test.R:92:5
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 15 ]
Error:
! Test failures.
Execution halted
WARNING
r-devel-macos-arm64
dependencies in R code
Missing or unexported object: ‘CVXR::solve’
ERROR
r-devel-macos-arm64
tests
Running ‘testthat.R’ [2s/2s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(starnet)
>
> testthat::test_check(package="starnet",stop_on_warning=FALSE)
Saving _problems/test-92.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 15 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test.R:92:5'): (code run outside of `test_that()`) ──────────────────
Error: 'solve' is not an exported object from 'namespace:CVXR'
Backtrace:
▆
1. └─starnet:::.glm(y = list$y, X = list$X, family = family) at test.R:92:5
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 15 ]
Error:
! Test failures.
Execution halted
WARNING
r-devel-windows-x86_64
dependencies in R code
Missing or unexported object: 'CVXR::solve'
ERROR
r-devel-windows-x86_64
tests
Running 'testthat.R' [8s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(starnet)
>
> testthat::test_check(package="starnet",stop_on_warning=FALSE)
Saving _problems/test-92.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 15 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test.R:92:5'): (code run outside of `test_that()`) ──────────────────
Error: 'solve' is not an exported object from 'namespace:CVXR'
Backtrace:
▆
1. └─starnet:::.glm(y = list$y, X = list$X, family = family) at test.R:92:5
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 15 ]
Error:
! Test failures.
Execution halted
WARNING
r-oldrel-windows-x86_64
dependencies in R code
Missing or unexported object: 'CVXR::solve'
ERROR
r-oldrel-windows-x86_64
tests
Running 'testthat.R' [11s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(starnet)
>
> testthat::test_check(package="starnet",stop_on_warning=FALSE)
Saving _problems/test-92.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 15 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test.R:92:5'): (code run outside of `test_that()`) ──────────────────
Error: 'solve' is not an exported object from 'namespace:CVXR'
Backtrace:
▆
1. └─starnet:::.glm(y = list$y, X = list$X, family = family) at test.R:92:5
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 15 ]
Error:
! Test failures.
Execution halted
WARNING
r-patched-linux-x86_64
dependencies in R code
Missing or unexported object: ‘CVXR::solve’
ERROR
r-patched-linux-x86_64
tests
Running ‘testthat.R’ [9s/11s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(starnet)
>
> testthat::test_check(package="starnet",stop_on_warning=FALSE)
Saving _problems/test-92.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 15 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test.R:92:5'): (code run outside of `test_that()`) ──────────────────
Error: 'solve' is not an exported object from 'namespace:CVXR'
Backtrace:
▆
1. └─starnet:::.glm(y = list$y, X = list$X, family = family) at test.R:92:5
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 15 ]
Error:
! Test failures.
Execution halted
WARNING
r-release-linux-x86_64
dependencies in R code
Missing or unexported object: ‘CVXR::solve’
ERROR
r-release-linux-x86_64
tests
Running ‘testthat.R’ [9s/10s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(starnet)
>
> testthat::test_check(package="starnet",stop_on_warning=FALSE)
Saving _problems/test-92.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 15 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test.R:92:5'): (code run outside of `test_that()`) ──────────────────
Error: 'solve' is not an exported object from 'namespace:CVXR'
Backtrace:
▆
1. └─starnet:::.glm(y = list$y, X = list$X, family = family) at test.R:92:5
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 15 ]
Error:
! Test failures.
Execution halted
WARNING
r-release-windows-x86_64
dependencies in R code
Missing or unexported object: 'CVXR::solve'
ERROR
r-release-windows-x86_64
tests
Running 'testthat.R' [7s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(starnet)
>
> testthat::test_check(package="starnet",stop_on_warning=FALSE)
Saving _problems/test-92.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 15 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test.R:92:5'): (code run outside of `test_that()`) ──────────────────
Error: 'solve' is not an exported object from 'namespace:CVXR'
Backtrace:
▆
1. └─starnet:::.glm(y = list$y, X = list$X, family = family) at test.R:92:5
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 15 ]
Error:
! Test failures.
Execution halted
Check History
ERROR 6 OK · 0 NOTE · 0 WARNING · 8 ERROR · 0 FAILURE Mar 10, 2026
ERROR
r-devel-linux-x86_64-debian-clang
dependencies in R code
Missing or unexported object: ‘CVXR::solve’
ERROR
r-devel-linux-x86_64-debian-gcc
dependencies in R code
Missing or unexported object: ‘CVXR::solve’
ERROR
r-devel-linux-x86_64-fedora-clang
dependencies in R code
Missing or unexported object: ‘CVXR::solve’
ERROR
r-devel-linux-x86_64-fedora-gcc
dependencies in R code
Missing or unexported object: ‘CVXR::solve’
ERROR
r-devel-windows-x86_64
dependencies in R code
Missing or unexported object: 'CVXR::solve'
ERROR
r-release-linux-x86_64
dependencies in R code
Missing or unexported object: ‘CVXR::solve’
ERROR
r-release-windows-x86_64
dependencies in R code
Missing or unexported object: 'CVXR::solve'
ERROR
r-oldrel-windows-x86_64
dependencies in R code
Missing or unexported object: 'CVXR::solve'