ravepipeline
Reproducible Pipeline Infrastructure for Neuroscience
Description
Defines the underlying pipeline structure for reproducible neuroscience, adopted by 'RAVE' (reproducible analysis and visualization of intracranial electroencephalography); provides high-level class definition to build, compile, set, execute, and share analysis pipelines. Both R and 'Python' are supported, with 'Markdown' and 'shiny' dashboard templates for extending and building customized pipelines. See the full documentations at <https://rave.wiki>; to cite us, check out our paper by Magnotti, Wang, and Beauchamp (2020, <doi:10.1016/j.neuroimage.2020.117341>), or run citation("ravepipeline") for details.
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CRAN Check Status
Show all 14 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | OK |
| r-devel-linux-x86_64-debian-gcc | OK |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-macos-arm64 | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | OK |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check History
OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 20, 2026
ERROR 13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Mar 16, 2026
examples
Running examples in ‘ravepipeline-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: rave-serialize-refhook
> ### Title: Serialization reference hook generic functions
> ### Aliases:
...[truncated]...
_unserialize_refhook)
>
> all(y0 == x0)
[1] TRUE
> all(y1[] == x0)
Error in fa_subset1(x, , ..., drop = drop, reshape = reshape, strict = strict, :
argument "tmp" is missing, with no default
Calls: [ -> [.FileArray -> fa_subset1
Execution halted