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ravepipeline

Reproducible Pipeline Infrastructure for Neuroscience

v0.0.3 · Sep 10, 2025 · MIT + file LICENSE

Description

Defines the underlying pipeline structure for reproducible neuroscience, adopted by 'RAVE' (reproducible analysis and visualization of intracranial electroencephalography); provides high-level class definition to build, compile, set, execute, and share analysis pipelines. Both R and 'Python' are supported, with 'Markdown' and 'shiny' dashboard templates for extending and building customized pipelines. See the full documentations at <https://rave.wiki>; to cite us, check out our paper by Magnotti, Wang, and Beauchamp (2020, <doi:10.1016/j.neuroimage.2020.117341>), or run citation("ravepipeline") for details.

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CRAN Check Status

14 OK
Show all 14 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 20, 2026
ERROR 13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Mar 16, 2026
ERROR r-devel-linux-x86_64-debian-gcc

examples

Running examples in ‘ravepipeline-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: rave-serialize-refhook
> ### Title: Serialization reference hook generic functions
> ### Aliases:
...[truncated]...
_unserialize_refhook)
> 
> all(y0 == x0)
[1] TRUE
> all(y1[] == x0)
Error in fa_subset1(x, , ..., drop = drop, reshape = reshape, strict = strict,  : 
  argument "tmp" is missing, with no default
Calls: [ -> [.FileArray -> fa_subset1
Execution halted
OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Reverse Dependencies (1)

imports

Dependency Network

Dependencies Reverse dependencies base64enc callr cli digest fastmap future fst glue jsonlite knitr promises R6 remotes rlang targets +3 more dependencies ravecore ravepipeline

Version History

new 0.0.3 Mar 10, 2026
updated 0.0.3 ← 0.0.1 diff Sep 9, 2025
new 0.0.1 Mar 12, 2025