rBiasCorrection

0.3.6

Correct Bias in DNA Methylation Analyses

1packages depend

11.1Kdownloads / year

–test coverage

13/13checks pass

Overview

About

Maintained by Lorenz A. KapsnerFirst published 2020-08-0416 releasesCRAN page ↗GitHub ↗

Implementation of the algorithms (with minor modifications) to correct bias in quantitative DNA methylation analyses as described by Moskalev et al. (2011) <doi:10.1093/nar/gkr213>. Publication: Kapsner et al. (2021) <doi:10.1002/ijc.33681>.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("rBiasCorrection")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

pak::pak("kapsner/rBiasCorrection")

Development version from kapsner/rBiasCorrection. Requires the pak package.

Release

# one-time r2u setup for Ubuntu (noble)

curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash

# then install

sudo apt install r-cran-rbiascorrection

Fast Ubuntu binaries via r2u (no compilation). Run the setup once per machine.

bspm (used by r2u) also needs make: sudo apt install make

sudo dnf copr enable iucar/cran

sudo dnf install R-CRAN-rBiasCorrection

RPMs from the iucar/cran COPR, rebuilt from CRAN.

sudo zypper install R-rBiasCorrection

RPMs auto-built from CRAN on openSUSE OBS.

Health

CRAN checks

13OK

Code health

Yes

Tests · ratio 0.82

not tracked

Coverage

100%

Documentation · exports

None

Vignettes

README

Dependencies · direct

Check history

OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Downloads

11.1K

CRAN downloads in the past year

Rank #4,159 · ~30/day · ~927/mo

rBiasCorrection Releases R versions

Daily download trend is not available in this view yet.

84130 days

2.4K90 days

11.1K1 year

Compare downloads with other packages →

Also on113 r2u21 autocran26 c2d4u

Source & community

GitHub ↗

Repository stars, issues, and contributor activity are not tracked yet.

Dependencies

Declared dependencies

14 external dependencies (excludes base and recommended)

Depends (1)

R >= 4.1.0

Imports (10)

data.table future future.apply ggplot2 minpack.lm nls2 parallelly polynomstatsutils

LinkingTo (0)

none

Suggests (6)

ggpubr knitr lintr microbenchmark quarto testthat (>= 3.0.1)

Enhances (0)

none

Reverse dependencies

1direct

–indirect (not tracked)

BiasCorrector

Code & Tests

Code Composition

R 5,733 (65%)Rd 1,274 (14%)Markdown 1,125 (13%)Other 451 (5%)Vignettes 260 (3%)

Test coverage

Line coverage

–

Expression

–

Tests / Examples

–

Functions

42 17 exported

Complexity

4.2 avg / 28 max

Call network

42 nodes / 55 edges

Test coverage has not been measured for this package yet; nodes fall back to a neutral fill.

Call graph

Open call graph →

Loading call graph…

Lowest coverage

Per-function coverage is not measured for this package yet.

People & History

People (2)

Maintainer (1)

Lorenz A. Kapsner

Maintainer, Author, Copyright holder

Authors (2)

Lorenz A. Kapsner

Maintainer, Author, Copyright holder

Evgeny A. Moskalev

Author

Lorenz A. Kapsner

Maintainer, Author, Copyright holder

Release timeline

16 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
0.3.6Latest
2026-03-07 · current release · diff ↗
R
R 4.5.0 released · 2025-04-11
0.3.5
2025-04-05 · diff ↗
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
0.3.4
2022-06-20 · diff ↗
R
R 4.2.0 released · 2022-04-22
0.3.3
2022-02-16 · diff ↗
0.3.2
2021-08-04 · diff ↗
0.3.1
2021-06-21 · diff ↗
R
R 4.1.0 released · 2021-05-18
0.3.0
2021-05-17 · diff ↗
0.2.9
2021-04-14 · diff ↗
0.2.8
2021-03-28 · diff ↗
0.2.7
2021-03-01 · diff ↗

Show 7 earlier events

0.2.6
2021-02-13 · diff ↗
0.2.5
2020-12-17 · diff ↗
0.2.4
2020-11-16 · diff ↗
0.2.3
2020-09-23 · diff ↗
0.2.2
2020-09-22 · diff ↗
0.2.1
2020-08-04
R
R 4.0.0 released · 2020-04-24

Package metadata

First published: 2020-08-04
Total releases: 16 / 6 yrs
License: GPL (>= 3) OSI
Download size: not tracked yet
Installed size: not tracked yet
With dependencies: not tracked yet