qtlcharts

0.22

Interactive Graphics for QTL Experiments

0packages depend

10.1Kdownloads / year

–test coverage

13/13checks pass

Overview

About

Maintained by Karl W BromanFirst published 2015-11-0812 releasesCRAN page ↗GitHub ↗

Web-based interactive charts (using D3.js) for the analysis of experimental crosses to identify genetic loci (quantitative trait loci, QTL) contributing to variation in quantitative traits. Broman (2015) <doi:10.1534/genetics.114.172742>.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("qtlcharts")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

pak::pak("kbroman/qtlcharts")

Development version from kbroman/qtlcharts. Requires the pak package.

Release

# one-time r2u setup for Ubuntu (noble)

curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash

# then install

sudo apt install r-cran-qtlcharts

Fast Ubuntu binaries via r2u (no compilation). Run the setup once per machine.

bspm (used by r2u) also needs make: sudo apt install make

sudo dnf copr enable iucar/cran

sudo dnf install R-CRAN-qtlcharts

RPMs from the iucar/cran COPR, rebuilt from CRAN.

sudo zypper install R-qtlcharts

RPMs auto-built from CRAN on openSUSE OBS.

Health

CRAN checks

13OK

Code health

Yes

Tests · ratio 0.34

not tracked

Coverage

100%

Documentation · exports

None

Vignettes

Yes

README

Dependencies · direct

Check history

OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Downloads

10.1K

CRAN downloads in the past year

Rank #4,967 · ~28/day · ~844/mo

qtlcharts Releases R versions

Daily download trend is not available in this view yet.

70730 days

2K90 days

10.1K1 year

Compare downloads with other packages →

Also on116 r2u14 autocran2.3K conda_forge

Source & community

GitHub ↗

Repository stars, issues, and contributor activity are not tracked yet.

Dependencies

Declared dependencies

9 external dependencies (excludes base and recommended)

Depends (1)

R >= 2.15

Imports (5)

qtl htmlwidgetsgraphicsstatsutils

LinkingTo (0)

none

Suggests (7)

htmltools jsonlite knitr devtools roxygen2 rmarkdown testthat

Enhances (0)

none

Reverse dependencies

0direct

–indirect (not tracked)

Nothing depends on this yet.

Code & Tests

Code Composition

R 3,550 (63%)Rd 1,450 (26%)Vignettes 595 (11%)

Test coverage

Line coverage

–

Expression

–

Tests / Examples

–

Functions

78 50 exported

Complexity

4.8 avg / 23 max

Call network

78 nodes / 85 edges

Test coverage has not been measured for this package yet; nodes fall back to a neutral fill.

Call graph

Open call graph →

Loading call graph…

Lowest coverage

Per-function coverage is not measured for this package yet.

People & History

People (5)

Maintainer (1)

Karl W Broman

Author, Maintainer

Authors (1)

Karl W Broman

Author, Maintainer

Contributors (3)

jQuery UI contributors

Contributor

jQuery contributors

Contributor

Michael Bostock

Contributor, Copyright holder

Michael Bostock

Contributor, Copyright holder

jQuery Foundation

Release timeline

12 releases. Pick two to compare their code metrics. R releases are shown for context.

0.22Latest
2026-06-19 · current release · diff ↗
0.20
2026-05-23 · diff ↗
R
R 4.6.0 released · 2026-04-24
0.18
2025-05-10 · diff ↗
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
R
R 4.2.0 released · 2022-04-22
0.16
2022-01-07 · diff ↗
0.14
2021-08-06 · diff ↗
R
R 4.1.0 released · 2021-05-18
0.12-10
2020-09-25 · diff ↗
R
R 4.0.0 released · 2020-04-24
R
R 3.6.0 released · 2019-04-26
0.11-6
2019-02-05 · diff ↗
R
R 3.5.0 released · 2018-04-23

Show 8 earlier events

0.9-6
2017-06-01 · diff ↗
R
R 3.4.0 released · 2017-04-21
0.7-8
2016-06-28 · diff ↗
R
R 3.3.0 released · 2016-05-03
0.6-6
2016-04-21 · diff ↗
0.5-25
2015-11-09 · diff ↗
0.5-23
2015-11-08
R
R 3.2.0 released · 2015-04-16

Package metadata

First published: 2015-11-08
Total releases: 12 / 11 yrs
License: GPL-3 | file LICENSE OSI
Download size: not tracked yet
Installed size: not tracked yet
With dependencies: not tracked yet