postGGIR
Data Processing after Running 'GGIR' for Accelerometer Data
Description
Generate all necessary R/Rmd/shell files for data processing after running 'GGIR' (v2.4.0) for accelerometer data. In part 1, all csv files in the GGIR output directory were read, transformed and then merged. In part 2, the GGIR output files were checked and summarized in one excel sheet. In part 3, the merged data was cleaned according to the number of valid hours on each night and the number of valid days for each subject. In part 4, the cleaned activity data was imputed by the average Euclidean norm minus one (ENMO) over all the valid days for each subject. Finally, a comprehensive report of data processing was created using Rmarkdown, and the report includes few exploratory plots and multiple commonly used features extracted from minute level actigraphy data.
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CRAN Check Status
Show all 14 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | OK |
| r-devel-linux-x86_64-debian-gcc | OK |
| r-devel-linux-x86_64-fedora-clang | NOTE |
| r-devel-linux-x86_64-fedora-gcc | NOTE |
| r-devel-macos-arm64 | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | OK |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (2 non-OK)
dependencies in R code
Namespaces in Imports field not imported from: ‘ActCR’ ‘ActFrag’ ‘tidyr’ All declared Imports should be used.
dependencies in R code
Namespaces in Imports field not imported from: ‘ActCR’ ‘ActFrag’ ‘tidyr’ All declared Imports should be used.
Check History
NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Apr 6, 2026
dependencies in R code
Namespaces in Imports field not imported from: ‘ActCR’ ‘ActFrag’ ‘tidyr’ All declared Imports should be used.
dependencies in R code
Namespaces in Imports field not imported from: ‘ActCR’ ‘ActFrag’ ‘tidyr’ All declared Imports should be used.
ERROR 11 OK · 2 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Apr 3, 2026
package dependencies
Package required but not available: ‘xlsx’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual.
dependencies in R code
Namespaces in Imports field not imported from: ‘ActCR’ ‘ActFrag’ ‘tidyr’ All declared Imports should be used.
dependencies in R code
Namespaces in Imports field not imported from: ‘ActCR’ ‘ActFrag’ ‘tidyr’ All declared Imports should be used.
NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
dependencies in R code
Namespaces in Imports field not imported from: ‘ActCR’ ‘ActFrag’ ‘tidyr’ All declared Imports should be used.
dependencies in R code
Namespaces in Imports field not imported from: ‘ActCR’ ‘ActFrag’ ‘tidyr’ All declared Imports should be used.