pkgndep
Analyze Dependency Heaviness of R Packages
v1.99.3
·
Oct 12, 2023
·
MIT + file LICENSE
Description
A new metric named 'dependency heaviness' is proposed that measures the number of additional dependency packages that a parent package brings to its child package and are unique to the dependency packages imported by all other parents. The dependency heaviness analysis is visualized by a customized heatmap. The package is described in <doi:10.1093/bioinformatics/btac449>. We have also performed the dependency heaviness analysis on the CRAN/Bioconductor package ecosystem and the results are implemented as a web-based database which provides comprehensive tools for querying dependencies of individual R packages. The systematic analysis on the CRAN/Bioconductor ecosystem is described in <doi:10.1016/j.jss.2023.111610>. From 'pkgndep' version 2.0.0, the heaviness database includes snapshots of the CRAN/Bioconductor ecosystems for many old R versions.
Downloads
366
Last 30 days
10408th
1.2K
Last 90 days
4.4K
Last year
Trend: -17.2% (30d vs prior 30d)
CRAN Check Status
9
NOTE
5
OK
Show all 14 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | NOTE |
| r-devel-linux-x86_64-debian-gcc | NOTE |
| r-devel-linux-x86_64-fedora-clang | NOTE |
| r-devel-linux-x86_64-fedora-gcc | NOTE |
| r-devel-macos-arm64 | NOTE |
| r-devel-windows-x86_64 | NOTE |
| r-oldrel-macos-arm64 | OK |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | NOTE |
| r-release-linux-x86_64 | NOTE |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | NOTE |
Check details (9 non-OK)
NOTE
r-devel-linux-x86_64-debian-clang
dependencies in R code
Unexported objects imported by ':::' calls: ‘ComplexHeatmap:::anno_width_and_height’ ‘ComplexHeatmap:::construct_axis_grob’ ‘ComplexHeatmap:::height’ ‘ComplexHeatmap:::update_anno_extend’ ‘ComplexHeatmap:::validate_axis_param’ ‘ComplexHeatmap:::width’ See the note in ?`:::` about the use of this operator.
NOTE
r-devel-linux-x86_64-debian-gcc
dependencies in R code
Unexported objects imported by ':::' calls: ‘ComplexHeatmap:::anno_width_and_height’ ‘ComplexHeatmap:::construct_axis_grob’ ‘ComplexHeatmap:::height’ ‘ComplexHeatmap:::update_anno_extend’ ‘ComplexHeatmap:::validate_axis_param’ ‘ComplexHeatmap:::width’ See the note in ?`:::` about the use of this operator.
NOTE
r-devel-linux-x86_64-fedora-clang
dependencies in R code
Unexported objects imported by ':::' calls: ‘ComplexHeatmap:::anno_width_and_height’ ‘ComplexHeatmap:::construct_axis_grob’ ‘ComplexHeatmap:::height’ ‘ComplexHeatmap:::update_anno_extend’ ‘ComplexHeatmap:::validate_axis_param’ ‘ComplexHeatmap:::width’ See the note in ?`:::` about the use of this operator.
NOTE
r-devel-linux-x86_64-fedora-gcc
dependencies in R code
Unexported objects imported by ':::' calls: ‘ComplexHeatmap:::anno_width_and_height’ ‘ComplexHeatmap:::construct_axis_grob’ ‘ComplexHeatmap:::height’ ‘ComplexHeatmap:::update_anno_extend’ ‘ComplexHeatmap:::validate_axis_param’ ‘ComplexHeatmap:::width’ See the note in ?`:::` about the use of this operator.
NOTE
r-devel-macos-arm64
dependencies in R code
Unexported objects imported by ':::' calls: ‘ComplexHeatmap:::anno_width_and_height’ ‘ComplexHeatmap:::construct_axis_grob’ ‘ComplexHeatmap:::height’ ‘ComplexHeatmap:::update_anno_extend’ ‘ComplexHeatmap:::validate_axis_param’ ‘ComplexHeatmap:::width’ See the note in ?`:::` about the use of this operator.
NOTE
r-devel-windows-x86_64
dependencies in R code
Unexported objects imported by ':::' calls: 'ComplexHeatmap:::anno_width_and_height' 'ComplexHeatmap:::construct_axis_grob' 'ComplexHeatmap:::height' 'ComplexHeatmap:::update_anno_extend' 'ComplexHeatmap:::validate_axis_param' 'ComplexHeatmap:::width' See the note in ?`:::` about the use of this operator.
NOTE
r-patched-linux-x86_64
dependencies in R code
Unexported objects imported by ':::' calls: ‘ComplexHeatmap:::anno_width_and_height’ ‘ComplexHeatmap:::construct_axis_grob’ ‘ComplexHeatmap:::height’ ‘ComplexHeatmap:::update_anno_extend’ ‘ComplexHeatmap:::validate_axis_param’ ‘ComplexHeatmap:::width’ See the note in ?`:::` about the use of this operator.
NOTE
r-release-linux-x86_64
dependencies in R code
Unexported objects imported by ':::' calls: ‘ComplexHeatmap:::anno_width_and_height’ ‘ComplexHeatmap:::construct_axis_grob’ ‘ComplexHeatmap:::height’ ‘ComplexHeatmap:::update_anno_extend’ ‘ComplexHeatmap:::validate_axis_param’ ‘ComplexHeatmap:::width’ See the note in ?`:::` about the use of this operator.
NOTE
r-release-windows-x86_64
dependencies in R code
Unexported objects imported by ':::' calls: 'ComplexHeatmap:::anno_width_and_height' 'ComplexHeatmap:::construct_axis_grob' 'ComplexHeatmap:::height' 'ComplexHeatmap:::update_anno_extend' 'ComplexHeatmap:::validate_axis_param' 'ComplexHeatmap:::width' See the note in ?`:::` about the use of this operator.
Check History
NOTE 8 OK · 6 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
NOTE
r-devel-linux-x86_64-debian-clang
dependencies in R code
Unexported objects imported by ':::' calls: ‘ComplexHeatmap:::anno_width_and_height’ ‘ComplexHeatmap:::construct_axis_grob’ ‘ComplexHeatmap:::height’ ‘ComplexHeatmap:::update_anno_extend’ ‘ComplexHeatmap:::validate_axis_param’ ‘ComplexHeatmap:::width’ See the note in ?`:::` about the use of this operator.
NOTE
r-devel-linux-x86_64-debian-gcc
dependencies in R code
Unexported objects imported by ':::' calls: ‘ComplexHeatmap:::anno_width_and_height’ ‘ComplexHeatmap:::construct_axis_grob’ ‘ComplexHeatmap:::height’ ‘ComplexHeatmap:::update_anno_extend’ ‘ComplexHeatmap:::validate_axis_param’ ‘ComplexHeatmap:::width’ See the note in ?`:::` about the use of this operator.
NOTE
r-devel-linux-x86_64-fedora-clang
dependencies in R code
Unexported objects imported by ':::' calls: ‘ComplexHeatmap:::anno_width_and_height’ ‘ComplexHeatmap:::construct_axis_grob’ ‘ComplexHeatmap:::height’ ‘ComplexHeatmap:::update_anno_extend’ ‘ComplexHeatmap:::validate_axis_param’ ‘ComplexHeatmap:::width’ See the note in ?`:::` about the use of this operator.
NOTE
r-devel-linux-x86_64-fedora-gcc
dependencies in R code
Unexported objects imported by ':::' calls: ‘ComplexHeatmap:::anno_width_and_height’ ‘ComplexHeatmap:::construct_axis_grob’ ‘ComplexHeatmap:::height’ ‘ComplexHeatmap:::update_anno_extend’ ‘ComplexHeatmap:::validate_axis_param’ ‘ComplexHeatmap:::width’ See the note in ?`:::` about the use of this operator.
NOTE
r-patched-linux-x86_64
dependencies in R code
Unexported objects imported by ':::' calls: ‘ComplexHeatmap:::anno_width_and_height’ ‘ComplexHeatmap:::construct_axis_grob’ ‘ComplexHeatmap:::height’ ‘ComplexHeatmap:::update_anno_extend’ ‘ComplexHeatmap:::validate_axis_param’ ‘ComplexHeatmap:::width’ See the note in ?`:::` about the use of this operator.
NOTE
r-release-linux-x86_64
dependencies in R code
Unexported objects imported by ':::' calls: ‘ComplexHeatmap:::anno_width_and_height’ ‘ComplexHeatmap:::construct_axis_grob’ ‘ComplexHeatmap:::height’ ‘ComplexHeatmap:::update_anno_extend’ ‘ComplexHeatmap:::validate_axis_param’ ‘ComplexHeatmap:::width’ See the note in ?`:::` about the use of this operator.
Dependency Network
Version History
new
1.99.3
Mar 10, 2026
new
1.0.0
May 20, 2020