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mpwR

Standardized Comparison of Workflows in Mass Spectrometry-Based Bottom-Up Proteomics

v0.1.5.1 · May 13, 2025 · MIT + file LICENSE

Description

Useful functions to analyze proteomic workflows including number of identifications, data completeness, missed cleavages, quantitative and retention time precision etc. Various software outputs are supported such as 'ProteomeDiscoverer', 'Spectronaut', 'DIA-NN' and 'MaxQuant'.

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r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Jun 9, 2026
ERROR 12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Jun 8, 2026
ERROR r-devel-linux-x86_64-debian-gcc

package dependencies

Package required but not available: ‘plotly’

Package suggested but not available for checking: ‘flextable’

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Dependency Network

Dependencies Reverse dependencies comprehenr data.table dplyr flowTraceR forcats ggplot2 magrittr plotly purrr stringr tibble tidyr UpSetR mpwR

Version History

7 tracked
new 0.1.5.1 Mar 10, 2026
updated 0.1.5.1 ← 0.1.5 diff May 12, 2025
updated 0.1.5 ← 0.1.4 diff Nov 13, 2023
updated 0.1.4 ← 0.1.3 diff May 4, 2023
updated 0.1.3 ← 0.1.2 diff Mar 15, 2023
updated 0.1.2 ← 0.1.0 diff Feb 11, 2023
new 0.1.0 Jun 21, 2022