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missDeaths

Simulating and Analyzing Time to Event Data in the Presence of Population Mortality

v2.8 · Sep 23, 2024 · GPL (>= 2)

Description

Implements two methods: a nonparametric risk adjustment and a data imputation method that use general population mortality tables to allow a correct analysis of time to disease recurrence. Also includes a powerful set of object oriented survival data simulation functions.

Downloads

CRAN

308

Last 30 days

14954th

688

Last 90 days

3.2K

Last year

Trend: +86.7% (30d vs prior 30d)

r2u CRAN

24

Last 30 days

114

Last 90 days

406

Last year

Trend: -40% (30d vs prior 30d)

autoCRAN

0

Last 7 days

8

Last 30 days

0

All-time

autoCRAN-only: this name is served only by autoCRAN, so the count is exact.

CRAN Check Status

13 OK
Show all 13 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Jun 9, 2026
ERROR 12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Jun 8, 2026
ERROR r-devel-linux-x86_64-debian-gcc

package dependencies

Packages required but not available: 'rms', 'relsurv'

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Apr 22, 2026
ERROR 13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Apr 18, 2026
ERROR r-devel-windows-x86_64

whether package can be installed

Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.6/missDeaths.Rcheck/00install.out' for details.
OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Apr 16, 2026
NOTE 13 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 27, 2026
NOTE r-devel-linux-x86_64-debian-gcc

compiled code

File ‘missDeaths/libs/missDeaths.so’:
  Found non-API call to R: ‘R_UnboundValue’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Code

Structure

Lines of code

2,748

Files

44

Compiled share

20.3%

Has compiled src

Yes

Language breakdown

R 1,294 (47.1%)C/C++/src 557 (20.3%)Docs 897 (32.6%)

API

Exported functions

23

Internal functions

10

Recent export changes

v2.8+1 md.survdump
v2.5+3 md.constant, md.expprep, md.survprob  −2 md.dateuniform, md.value

Testing & CI

Has tests

No

Test-to-code ratio

0.00

testthat edition

CI present

No

CI type

[]

PR gated

No

Docs

Return-value doc rate

17.4%

\dontrun example ratio

94.4%

Roxygen coverage

100%

Has pkgdown

No

NEWS present

No

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

Unsafe pattern score

0

Dep constraint coverage

12.5%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

System requirements

C++ standard

License

GPL (>= 2)

License flags

SPDX valid, OSI approved

History

Versions

10

First release

2015-06-21

Latest release

2024-09-23

Avg cadence

153 days

Cold removal rate

100%

Dep drift

3

LOC over versions

v1.0: 1,644 LOCv1.2: 1,436 LOCv2.0: 3,104 LOCv2.1: 2,588 LOCv2.2: 2,669 LOCv2.5: 2,698 LOCv2.5.1: 2,698 LOCv2.6: 2,692 LOCv2.7: 2,745 LOCv2.8: 2,748 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/cran-code-metrics.

Dependency Network

Dependencies Reverse dependencies survival rms relsurv cmprsk MASS Rcpp mitools missDeaths

Version History

11 tracked
new 2.8 Mar 10, 2026
updated 2.8 ← 2.7 diff Sep 22, 2024
updated 2.7 ← 2.6 diff Oct 16, 2020
updated 2.6 ← 2.5.1 diff May 16, 2020
updated 2.5.1 ← 2.5 diff Apr 23, 2019
updated 2.5 ← 2.2 diff May 13, 2017
updated 2.2 ← 2.1 diff Feb 16, 2017
updated 2.1 ← 2.0 diff Feb 11, 2017
updated 2.0 ← 1.2 diff Feb 4, 2017
updated 1.2 ← 1.0 diff Aug 8, 2015
new 1.0 Jun 21, 2015