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Removed from CRAN

This package is no longer available on CRAN, archived Mar 18, 2026. The details below reflect its last known state.

microhaplot

v1.0.1 · ·
CRAN Archive GitHub Mirror

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Last Known Check Status

ERROR Mar 10, 2026

3 OK · 2 NOTE · 0 WARNING · 9 ERROR · 0 FAILURE

Check History

Archived
Mar 18, 2026
ERROR 3 OK · 2 NOTE · 0 WARNING · 9 ERROR · 0 FAILURE Mar 10, 2026
ERROR r-devel-linux-x86_64-debian-clang

examples

Running examples in ‘microhaplot-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: prepHaplotFiles
> ### Title: Extracts haplotype from alignment reads.
> ### Aliases: prepHaplotFil
...[truncated]...
::prepHaplotFiles(...)
 2. │ └─... %>% dplyr::tbl_df()
 3. └─dplyr::tbl_df(.)
 4.   └─lifecycle::deprecate_stop("1.0.0", "tbl_df()", "tibble::as_tibble()")
 5.     └─lifecycle:::deprecate_stop0(msg)
 6.       └─rlang::cnd_signal(...)
Execution halted
ERROR r-devel-linux-x86_64-debian-gcc

examples

Running examples in ‘microhaplot-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: prepHaplotFiles
> ### Title: Extracts haplotype from alignment reads.
> ### Aliases: prepHaplotFil
...[truncated]...
::prepHaplotFiles(...)
 2. │ └─... %>% dplyr::tbl_df()
 3. └─dplyr::tbl_df(.)
 4.   └─lifecycle::deprecate_stop("1.0.0", "tbl_df()", "tibble::as_tibble()")
 5.     └─lifecycle:::deprecate_stop0(msg)
 6.       └─rlang::cnd_signal(...)
Execution halted
ERROR r-devel-linux-x86_64-fedora-clang

dependencies in R code

Namespaces in Imports field not imported from:
  ‘DT’ ‘ggiraph’ ‘ggplot2’ ‘grid’ ‘gtools’ ‘scales’ ‘shinyBS’
  ‘shinyWidgets’ ‘tidyr’
  All declared Imports should be used.
ERROR r-devel-linux-x86_64-fedora-gcc

dependencies in R code

Namespaces in Imports field not imported from:
  ‘DT’ ‘ggiraph’ ‘ggplot2’ ‘grid’ ‘gtools’ ‘scales’ ‘shinyBS’
  ‘shinyWidgets’ ‘tidyr’
  All declared Imports should be used.
ERROR r-devel-windows-x86_64

examples

Running examples in 'microhaplot-Ex.R' failed
The error most likely occurred in:

> ### Name: prepHaplotFiles
> ### Title: Extracts haplotype from alignment reads.
> ### Aliases: prepHaplotFiles
> 
> ### ** Examples
> 
> 
> run.label <- "sebastes"
> 
...[truncated]...
::prepHaplotFiles(...)
 2. │ └─... %>% dplyr::tbl_df()
 3. └─dplyr::tbl_df(.)
 4.   └─lifecycle::deprecate_stop("1.0.0", "tbl_df()", "tibble::as_tibble()")
 5.     └─lifecycle:::deprecate_stop0(msg)
 6.       └─rlang::cnd_signal(...)
Execution halted
ERROR r-patched-linux-x86_64

examples

Running examples in ‘microhaplot-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: prepHaplotFiles
> ### Title: Extracts haplotype from alignment reads.
> ### Aliases: prepHaplotFil
...[truncated]...
::prepHaplotFiles(...)
 2. │ └─... %>% dplyr::tbl_df()
 3. └─dplyr::tbl_df(.)
 4.   └─lifecycle::deprecate_stop("1.0.0", "tbl_df()", "tibble::as_tibble()")
 5.     └─lifecycle:::deprecate_stop0(msg)
 6.       └─rlang::cnd_signal(...)
Execution halted
ERROR r-release-linux-x86_64

examples

Running examples in ‘microhaplot-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: prepHaplotFiles
> ### Title: Extracts haplotype from alignment reads.
> ### Aliases: prepHaplotFil
...[truncated]...
::prepHaplotFiles(...)
 2. │ └─... %>% dplyr::tbl_df()
 3. └─dplyr::tbl_df(.)
 4.   └─lifecycle::deprecate_stop("1.0.0", "tbl_df()", "tibble::as_tibble()")
 5.     └─lifecycle:::deprecate_stop0(msg)
 6.       └─rlang::cnd_signal(...)
Execution halted
ERROR r-release-windows-x86_64

examples

Running examples in 'microhaplot-Ex.R' failed
The error most likely occurred in:

> ### Name: prepHaplotFiles
> ### Title: Extracts haplotype from alignment reads.
> ### Aliases: prepHaplotFiles
> 
> ### ** Examples
> 
> 
> run.label <- "sebastes"
> 
...[truncated]...
::prepHaplotFiles(...)
 2. │ └─... %>% dplyr::tbl_df()
 3. └─dplyr::tbl_df(.)
 4.   └─lifecycle::deprecate_stop("1.0.0", "tbl_df()", "tibble::as_tibble()")
 5.     └─lifecycle:::deprecate_stop0(msg)
 6.       └─rlang::cnd_signal(...)
Execution halted
NOTE r-oldrel-macos-arm64

LazyData

'LazyData' is specified without a 'data' directory
NOTE r-oldrel-macos-x86_64

LazyData

'LazyData' is specified without a 'data' directory
ERROR r-oldrel-windows-x86_64

LazyData

'LazyData' is specified without a 'data' directory

Version History

2 tracked
removed 1.0.1 Mar 18, 2026
new 1.0.1 Mar 10, 2026