landsepi
Landscape Epidemiology and Evolution
Description
A stochastic, spatially-explicit, demo-genetic model simulating the spread and evolution of a plant pathogen in a heterogeneous landscape to assess resistance deployment strategies. It is based on a spatial geometry for describing the landscape and allocation of different cultivars, a dispersal kernel for the dissemination of the pathogen, and a SEIR ('Susceptible-Exposed-Infectious-Removed’) structure with a discrete time step. It provides a useful tool to assess the performance of a wide range of deployment options with respect to their epidemiological, evolutionary and economic outcomes. Loup Rimbaud, Julien Papaïx, Jean-François Rey, Luke G Barrett, Peter H Thrall (2018) <doi:10.1371/journal.pcbi.1006067>.
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CRAN Check Status
Show all 14 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | OK |
| r-devel-linux-x86_64-debian-gcc | OK |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-macos-arm64 | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | NOTE |
| r-oldrel-macos-x86_64 | NOTE |
| r-oldrel-windows-x86_64 | NOTE |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (3 non-OK)
installed package size
installed size is 10.1Mb
sub-directories of 1Mb or more:
doc 1.9Mb
libs 5.9Mb
installed package size
installed size is 10.4Mb
sub-directories of 1Mb or more:
doc 1.9Mb
libs 6.1Mb
installed package size
installed size is 6.2Mb
sub-directories of 1Mb or more:
doc 1.9Mb
libs 1.9Mb
Check History
NOTE 11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
installed package size
installed size is 10.1Mb
sub-directories of 1Mb or more:
doc 1.9Mb
libs 5.9Mb
installed package size
installed size is 10.4Mb
sub-directories of 1Mb or more:
doc 1.9Mb
libs 6.1Mb
installed package size
installed size is 6.2Mb
sub-directories of 1Mb or more:
doc 1.9Mb
libs 1.9Mb