kantorovich
Kantorovich Distance Between Probability Measures
Description
Computes the Kantorovich distance between two probability measures on a finite set. The Kantorovich distance is also known as the Monge-Kantorovich distance or the first Wasserstein distance.
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Check details (53 non-OK)
CRAN incoming feasibility
Maintainer: ‘Stéphane Laurent <laurent_step@outlook.fr>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Stéphane",
family = "Laurent",
role = c("aut", "cre"),
email = "laurent_step@outlook.fr")
as necessary.
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘kantorovich_ompr.R’
examples
Running examples in ‘kantorovich-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: kantorovich_CVX
> ### Title: Computes Kantorovich distance with CVX
> ### Aliases: kantorovich_CVX
>
> ### ** Examples
>
> x <- c(1.5, 2, -3)
> mu <- c(1/7, 2/7, 4/7)
> y <- c(4, 3.5, 0, -2)
> nu <- c(1/4, 1/4, 1/4, 1/4)
> M <- outer(x, y, FUN = function(x, y) abs(x - y))
> kantorovich_CVX(mu, nu, dist = M)
Error in `method(solve_via_data, CVXR::ECOS_Solver)`:
! Package ECOSolveR is required but not installed.
Backtrace:
▆
1. └─kantorovich::kantorovich_CVX(mu, nu, dist = M)
2. └─CVXR::psolve(problem, solver = solver, ...)
3. └─CVXR::solve_via_data(...)
4. ├─S7::S7_dispatch()
5. └─CVXR (local) `method(solve_via_data, CVXR::SolvingChain)`(...)
6. └─CVXR::solve_via_data(...)
7. ├─S7::S7_dispatch()
8. └─CVXR (local) `method(solve_via_data, CVXR::ECOS_Solver)`(...)
9. └─cli::cli_abort("Package {.pkg ECOSolveR} is required but not installed.")
10. └─rlang::abort(...)
Execution halted
re-building of vignette outputs
Error(s) in re-building vignettes:
...
--- re-building ‘kantorovich.Rmd’ using rmarkdown
Quitting from kantorovich.Rmd:176-189 [unnamed-chunk-14]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `method(solve_via_data, CVXR::ECOS_Solver)`:
! Package ECOSolveR is required but not installed.
---
Backtrace:
▆
1. └─kantorovich::kantorovich_CVX(mu, nu, dist = M)
2. └─CVXR::psolve(problem, solver = solver, ...)
3. └─CVXR::solve_via_data(...)
4. ├─S7::S7_dispatch()
5. └─CVXR (local) `method(solve_via_data, CVXR::SolvingChain)`(...)
6. └─CVXR::solve_via_data(...)
7. ├─S7::S7_dispatch()
8. └─CVXR (local) `method(solve_via_data, CVXR::ECOS_Solver)`(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'kantorovich.Rmd' failed with diagnostics:
Package ECOSolveR is required but not installed.
--- failed re-building ‘kantorovich.Rmd’
SUMMARY: processing the following file failed:
‘kantorovich.Rmd’
Error: Vignette re-building failed.
Execution halted
tests
Running ‘testthat.R’ [8s/10s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(kantorovich)
Warning message:
replacing previous import 'CVXR::outer' by 'gmp::outer' when loading 'kantorovich'
> library(gmp)
Attaching package: 'gmp'
The following objects are masked from 'package:base':
%*%, apply, crossprod, matrix, tcrossprod
>
> test_check("kantorovich")
Saving _problems/test-CVX-6.R
Saving _problems/test-CVX-16.R
Saving _problems/test-CVX-37.R
[ FAIL 3 | WARN 0 | SKIP 0 | PASS 130 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-CVX.R:6:3'): kantorovich_CVX default distance ──────────────────
Error in ``method(solve_via_data, CVXR::ECOS_Solver)`(x = <object>, data = list(c = c(0, 1, 1, 1, 0, 1, 1, 1, 0), A = new("dgCMatrix", i = c(0L, 3L, 6L, 0L, 4L, 7L, 0L, 5L, 8L, 1L, 3L, 9L, 1L, 4L, 10L, 1L, 5L, 11L, 2L, 3L, 12L, 2L, 4L, 13L, 2L, 5L
...[truncated]...
857143, 0.285714285714286, 0.571428571428571, 0.333333333333333, 0.111111111111111, 0.555555555555556, 0, 0, 0, 0, 0, 0, 0, 0, 0), dims = <object>, bool_idx = integer(0), int_idx = integer(0)), warm_start = FALSE, verbose = FALSE, solver_opts = list(), ...)`: Package ECOSolveR is required but not installed.
Backtrace:
▆
1. └─kantorovich::kantorovich_CVX(mu, nu, dist = D) at test-CVX.R:37:3
2. └─CVXR::psolve(problem, solver = solver, ...)
3. └─CVXR::solve_via_data(...)
4. ├─S7::S7_dispatch()
5. └─CVXR (local) `method(solve_via_data, CVXR::SolvingChain)`(...)
6. └─CVXR::solve_via_data(...)
7. ├─S7::S7_dispatch()
8. └─CVXR (local) `method(solve_via_data, CVXR::ECOS_Solver)`(...)
9. └─cli::cli_abort("Package {.pkg ECOSolveR} is required but not installed.")
10. └─rlang::abort(...)
[ FAIL 3 | WARN 0 | SKIP 0 | PASS 130 ]
Error:
! Test failures.
Execution halted
whether package can be installed
Found the following significant warnings: Warning: replacing previous import ‘CVXR::outer’ by ‘gmp::outer’ when loading ‘kantorovich’ See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/kantorovich.Rcheck/00install.out’ for details.
CRAN incoming feasibility
Maintainer: ‘Stéphane Laurent <laurent_step@outlook.fr>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Stéphane",
family = "Laurent",
role = c("aut", "cre"),
email = "laurent_step@outlook.fr")
as necessary.
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘kantorovich_ompr.R’
examples
Running examples in ‘kantorovich-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: kantorovich_CVX
> ### Title: Computes Kantorovich distance with CVX
> ### Aliases: kantorovich_CVX
>
> ### ** Examples
>
> x <- c(1.5, 2, -3)
> mu <- c(1/7, 2/7, 4/7)
> y <- c(4, 3.5, 0, -2)
> nu <- c(1/4, 1/4, 1/4, 1/4)
> M <- outer(x, y, FUN = function(x, y) abs(x - y))
> kantorovich_CVX(mu, nu, dist = M)
Error in `method(solve_via_data, CVXR::ECOS_Solver)`:
! Package ECOSolveR is required but not installed.
Backtrace:
▆
1. └─kantorovich::kantorovich_CVX(mu, nu, dist = M)
2. └─CVXR::psolve(problem, solver = solver, ...)
3. └─CVXR::solve_via_data(...)
4. ├─S7::S7_dispatch()
5. └─CVXR (local) `method(solve_via_data, CVXR::SolvingChain)`(...)
6. └─CVXR::solve_via_data(...)
7. ├─S7::S7_dispatch()
8. └─CVXR (local) `method(solve_via_data, CVXR::ECOS_Solver)`(...)
9. └─cli::cli_abort("Package {.pkg ECOSolveR} is required but not installed.")
10. └─rlang::abort(...)
Execution halted
re-building of vignette outputs
Error(s) in re-building vignettes:
...
--- re-building ‘kantorovich.Rmd’ using rmarkdown
Quitting from kantorovich.Rmd:176-189 [unnamed-chunk-14]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `method(solve_via_data, CVXR::ECOS_Solver)`:
! Package ECOSolveR is required but not installed.
---
Backtrace:
▆
1. └─kantorovich::kantorovich_CVX(mu, nu, dist = M)
2. └─CVXR::psolve(problem, solver = solver, ...)
3. └─CVXR::solve_via_data(...)
4. ├─S7::S7_dispatch()
5. └─CVXR (local) `method(solve_via_data, CVXR::SolvingChain)`(...)
6. └─CVXR::solve_via_data(...)
7. ├─S7::S7_dispatch()
8. └─CVXR (local) `method(solve_via_data, CVXR::ECOS_Solver)`(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'kantorovich.Rmd' failed with diagnostics:
Package ECOSolveR is required but not installed.
--- failed re-building ‘kantorovich.Rmd’
SUMMARY: processing the following file failed:
‘kantorovich.Rmd’
Error: Vignette re-building failed.
Execution halted
tests
Running ‘testthat.R’ [6s/8s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(kantorovich)
Warning message:
replacing previous import 'CVXR::outer' by 'gmp::outer' when loading 'kantorovich'
> library(gmp)
Attaching package: 'gmp'
The following objects are masked from 'package:base':
%*%, apply, crossprod, matrix, tcrossprod
>
> test_check("kantorovich")
Saving _problems/test-CVX-6.R
Saving _problems/test-CVX-16.R
Saving _problems/test-CVX-37.R
[ FAIL 3 | WARN 0 | SKIP 0 | PASS 130 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-CVX.R:6:3'): kantorovich_CVX default distance ──────────────────
Error in ``method(solve_via_data, CVXR::ECOS_Solver)`(x = <object>, data = list(c = c(0, 1, 1, 1, 0, 1, 1, 1, 0), A = new("dgCMatrix", i = c(0L, 3L, 6L, 0L, 4L, 7L, 0L, 5L, 8L, 1L, 3L, 9L, 1L, 4L, 10L, 1L, 5L, 11L, 2L, 3L, 12L, 2L, 4L, 13L, 2L, 5L,
...[truncated]...
857143, 0.285714285714286, 0.571428571428571, 0.333333333333333, 0.111111111111111, 0.555555555555556, 0, 0, 0, 0, 0, 0, 0, 0, 0), dims = <object>, bool_idx = integer(0), int_idx = integer(0)), warm_start = FALSE, verbose = FALSE, solver_opts = list(), ...)`: Package ECOSolveR is required but not installed.
Backtrace:
▆
1. └─kantorovich::kantorovich_CVX(mu, nu, dist = D) at test-CVX.R:37:3
2. └─CVXR::psolve(problem, solver = solver, ...)
3. └─CVXR::solve_via_data(...)
4. ├─S7::S7_dispatch()
5. └─CVXR (local) `method(solve_via_data, CVXR::SolvingChain)`(...)
6. └─CVXR::solve_via_data(...)
7. ├─S7::S7_dispatch()
8. └─CVXR (local) `method(solve_via_data, CVXR::ECOS_Solver)`(...)
9. └─cli::cli_abort("Package {.pkg ECOSolveR} is required but not installed.")
10. └─rlang::abort(...)
[ FAIL 3 | WARN 0 | SKIP 0 | PASS 130 ]
Error:
! Test failures.
Execution halted
whether package can be installed
Found the following significant warnings: Warning: replacing previous import ‘CVXR::outer’ by ‘gmp::outer’ when loading ‘kantorovich’ See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/kantorovich.Rcheck/00install.out’ for details.
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘kantorovich_ompr.R’
examples
Running examples in ‘kantorovich-Ex.R’ failed
The error most likely occurred in:
> ### Name: kantorovich_CVX
> ### Title: Computes Kantorovich distance with CVX
> ### Aliases: kantorovich_CVX
>
> ### ** Examples
>
> x <- c(1.5, 2, -3)
> mu <- c(1/7, 2/7, 4/7)
> y <- c(4, 3.5, 0, -2)
> nu <- c(1/4, 1/4, 1/4, 1/4)
> M <- outer(x, y, FUN = function(x, y) abs(x - y))
> kantorovich_CVX(mu, nu, dist = M)
Error in `method(solve_via_data, CVXR::ECOS_Solver)`:
! Package ECOSolveR is required but not installed.
Backtrace:
▆
1. └─kantorovich::kantorovich_CVX(mu, nu, dist = M)
2. └─CVXR::psolve(problem, solver = solver, ...)
3. └─CVXR::solve_via_data(...)
4. ├─S7::S7_dispatch()
5. └─CVXR (local) `method(solve_via_data, CVXR::SolvingChain)`(...)
6. └─CVXR::solve_via_data(...)
7. ├─S7::S7_dispatch()
8. └─CVXR (local) `method(solve_via_data, CVXR::ECOS_Solver)`(...)
9. └─cli::cli_abort("Package {.pkg ECOSolveR} is required but not installed.")
10. └─rlang::abort(...)
Execution halted
re-building of vignette outputs
Error(s) in re-building vignettes:
--- re-building ‘kantorovich.Rmd’ using rmarkdown
Quitting from kantorovich.Rmd:176-189 [unnamed-chunk-14]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `method(solve_via_data, CVXR::ECOS_Solver)`:
! Package ECOSolveR is required but not installed.
---
Backtrace:
▆
1. └─kantorovich::kantorovich_CVX(mu, nu, dist = M)
2. └─CVXR::psolve(problem, solver = solver, ...)
3. └─CVXR::solve_via_data(...)
4. ├─S7::S7_dispatch()
5. └─CVXR (local) `method(solve_via_data, CVXR::SolvingChain)`(...)
6. └─CVXR::solve_via_data(...)
7. ├─S7::S7_dispatch()
8. └─CVXR (local) `method(solve_via_data, CVXR::ECOS_Solver)`(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'kantorovich.Rmd' failed with diagnostics:
Package ECOSolveR is required but not installed.
--- failed re-building ‘kantorovich.Rmd’
SUMMARY: processing the following file failed:
‘kantorovich.Rmd’
Error: Vignette re-building failed.
Execution halted
tests
Running ‘testthat.R’ [14s/39s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(kantorovich)
Warning message:
replacing previous import 'CVXR::outer' by 'gmp::outer' when loading 'kantorovich'
> library(gmp)
Attaching package: 'gmp'
The following objects are masked from 'package:base':
%*%, apply, crossprod, matrix, tcrossprod
>
> test_check("kantorovich")
Saving _problems/test-CVX-6.R
Saving _problems/test-CVX-16.R
Saving _problems/test-CVX-37.R
[ FAIL 3 | WARN 0 | SKIP 0 | PASS 130 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-CVX.R:6:3'): kantorovich_CVX default distance ──────────────────
Error in ``method(solve_via_data, CVXR::ECOS_Solver)`(x = <object>, data = list(c = c(0, 1, 1, 1, 0, 1, 1, 1, 0), A = new("dgCMatrix", i = c(0L, 3L, 6L, 0L, 4L, 7L, 0L, 5L, 8L, 1L, 3L, 9L, 1L, 4L, 10L, 1L, 5L, 11L, 2L, 3L, 12L, 2L, 4L, 13L, 2L, 5
...[truncated]...
857143, 0.285714285714286, 0.571428571428571, 0.333333333333333, 0.111111111111111, 0.555555555555556, 0, 0, 0, 0, 0, 0, 0, 0, 0), dims = <object>, bool_idx = integer(0), int_idx = integer(0)), warm_start = FALSE, verbose = FALSE, solver_opts = list(), ...)`: Package ECOSolveR is required but not installed.
Backtrace:
▆
1. └─kantorovich::kantorovich_CVX(mu, nu, dist = D) at test-CVX.R:37:3
2. └─CVXR::psolve(problem, solver = solver, ...)
3. └─CVXR::solve_via_data(...)
4. ├─S7::S7_dispatch()
5. └─CVXR (local) `method(solve_via_data, CVXR::SolvingChain)`(...)
6. └─CVXR::solve_via_data(...)
7. ├─S7::S7_dispatch()
8. └─CVXR (local) `method(solve_via_data, CVXR::ECOS_Solver)`(...)
9. └─cli::cli_abort("Package {.pkg ECOSolveR} is required but not installed.")
10. └─rlang::abort(...)
[ FAIL 3 | WARN 0 | SKIP 0 | PASS 130 ]
Error:
! Test failures.
Execution halted
whether package can be installed
Found the following significant warnings: Warning: replacing previous import ‘CVXR::outer’ by ‘gmp::outer’ when loading ‘kantorovich’ See ‘/data/gannet/ripley/R/packages/tests-clang/kantorovich.Rcheck/00install.out’ for details.
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘kantorovich_ompr.R’
examples
Running examples in ‘kantorovich-Ex.R’ failed The error most likely occurred in: > ### Name: kantorovich_CVX > ### Title: Computes Kantorovich distance with CVX > ### Aliases: kantorovich_CVX > > ### ** Examples > > x <- c(1.5, 2, -3) > mu <- c(1/7, 2/7, 4/7) > y <- c(4, 3.5, 0, -2) > nu <- c(1/4, 1/4, 1/4, 1/4) > M <- outer(x, y, FUN = function(x, y) abs(x - y)) > kantorovich_CVX(mu, nu, dist = M) Error in kanto$status : $ operator is invalid for atomic vectors Calls: kantorovich_CVX Execution halted
re-building of vignette outputs
Error(s) in re-building vignettes:
--- re-building ‘kantorovich.Rmd’ using rmarkdown
Quitting from kantorovich.Rmd:176-189 [unnamed-chunk-14]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `kanto$status`:
! $ operator is invalid for atomic vectors
---
Backtrace:
▆
1. └─kantorovich::kantorovich_CVX(mu, nu, dist = M)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'kantorovich.Rmd' failed with diagnostics:
$ operator is invalid for atomic vectors
--- failed re-building ‘kantorovich.Rmd’
SUMMARY: processing the following file failed:
‘kantorovich.Rmd’
Error: Vignette re-building failed.
Execution halted
tests
Running ‘testthat.R’ [12s/13s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(kantorovich)
Warning message:
replacing previous import 'CVXR::outer' by 'gmp::outer' when loading 'kantorovich'
> library(gmp)
Attaching package: 'gmp'
The following objects are masked from 'package:base':
%*%, apply, crossprod, matrix, tcrossprod
>
> test_check("kantorovich")
Saving _problems/test-CVX-6.R
Saving _problems/test-CVX-16.R
Saving _problems/test-CVX-37.R
[ FAIL 3 | WARN 0 | SKIP 0 | PASS 130 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-CVX.R:6:3'): kantorovich_CVX default distance ──────────────────
Error in `kanto$status`: $ operator is invalid for atomic vectors
Backtrace:
▆
1. └─kantorovich::kantorovich_CVX(mu, nu, dist = 1 - diag(3L)) at test-CVX.R:6:3
── Error ('test-CVX.R:16:3'): kantorovich_CVX - specified distance ─────────────
Error in `kanto$status`: $ operator is invalid for atomic vectors
Backtrace:
▆
1. └─kantorovich::kantorovich_CVX(mu, nu, dist = dist) at test-CVX.R:16:3
── Error ('test-CVX.R:37:3'): kantorovich_CVX - nonsymmetric dist ──────────────
Error in `kanto$status`: $ operator is invalid for atomic vectors
Backtrace:
▆
1. └─kantorovich::kantorovich_CVX(mu, nu, dist = D) at test-CVX.R:37:3
[ FAIL 3 | WARN 0 | SKIP 0 | PASS 130 ]
Error:
! Test failures.
Execution halted
whether package can be installed
Found the following significant warnings: Warning: replacing previous import ‘CVXR::outer’ by ‘gmp::outer’ when loading ‘kantorovich’ See ‘/data/gannet/ripley/R/packages/tests-devel/kantorovich.Rcheck/00install.out’ for details.
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘kantorovich_ompr.R’
examples
Running examples in ‘kantorovich-Ex.R’ failed The error most likely occurred in: > ### Name: kantorovich_CVX > ### Title: Computes Kantorovich distance with CVX > ### Aliases: kantorovich_CVX > > ### ** Examples > > x <- c(1.5, 2, -3) > mu <- c(1/7, 2/7, 4/7) > y <- c(4, 3.5, 0, -2) > nu <- c(1/4, 1/4, 1/4, 1/4) > M <- outer(x, y, FUN = function(x, y) abs(x - y)) > kantorovich_CVX(mu, nu, dist = M) Error in kanto$status : $ operator is invalid for atomic vectors Calls: kantorovich_CVX Execution halted
re-building of vignette outputs
Error(s) in re-building vignettes:
--- re-building ‘kantorovich.Rmd’ using rmarkdown
Quitting from kantorovich.Rmd:176-189 [unnamed-chunk-14]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `kanto$status`:
! $ operator is invalid for atomic vectors
---
Backtrace:
▆
1. └─kantorovich::kantorovich_CVX(mu, nu, dist = M)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'kantorovich.Rmd' failed with diagnostics:
$ operator is invalid for atomic vectors
--- failed re-building ‘kantorovich.Rmd’
SUMMARY: processing the following file failed:
‘kantorovich.Rmd’
Error: Vignette re-building failed.
Execution halted
tests
Running ‘testthat.R’ [2s/2s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(kantorovich)
Warning message:
replacing previous import 'CVXR::outer' by 'gmp::outer' when loading 'kantorovich'
> library(gmp)
Attaching package: 'gmp'
The following objects are masked from 'package:base':
%*%, apply, crossprod, matrix, tcrossprod
>
> test_check("kantorovich")
Saving _problems/test-CVX-6.R
Saving _problems/test-CVX-16.R
Saving _problems/test-CVX-37.R
[ FAIL 3 | WARN 0 | SKIP 0 | PASS 130 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-CVX.R:6:3'): kantorovich_CVX default distance ──────────────────
Error in `kanto$status`: $ operator is invalid for atomic vectors
Backtrace:
▆
1. └─kantorovich::kantorovich_CVX(mu, nu, dist = 1 - diag(3L)) at test-CVX.R:6:3
── Error ('test-CVX.R:16:3'): kantorovich_CVX - specified distance ─────────────
Error in `kanto$status`: $ operator is invalid for atomic vectors
Backtrace:
▆
1. └─kantorovich::kantorovich_CVX(mu, nu, dist = dist) at test-CVX.R:16:3
── Error ('test-CVX.R:37:3'): kantorovich_CVX - nonsymmetric dist ──────────────
Error in `kanto$status`: $ operator is invalid for atomic vectors
Backtrace:
▆
1. └─kantorovich::kantorovich_CVX(mu, nu, dist = D) at test-CVX.R:37:3
[ FAIL 3 | WARN 0 | SKIP 0 | PASS 130 ]
Error:
! Test failures.
Execution halted
whether package can be installed
Found the following significant warnings: Warning: replacing previous import ‘CVXR::outer’ by ‘gmp::outer’ when loading ‘kantorovich’ See ‘/Volumes/Builds/packages/sonoma-arm64/results/4.6/kantorovich.Rcheck/00install.out’ for details.
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
'kantorovich_ompr.R'
examples
Running examples in 'kantorovich-Ex.R' failed
The error most likely occurred in:
> ### Name: kantorovich_CVX
> ### Title: Computes Kantorovich distance with CVX
> ### Aliases: kantorovich_CVX
>
> ### ** Examples
>
> x <- c(1.5, 2, -3)
> mu <- c(1/7, 2/7, 4/7)
> y <- c(4, 3.5, 0, -2)
> nu <- c(1/4, 1/4, 1/4, 1/4)
> M <- outer(x, y, FUN = function(x, y) abs(x - y))
> kantorovich_CVX(mu, nu, dist = M)
Error in `method(solve_via_data, CVXR::ECOS_Solver)`:
! Package ECOSolveR is required but not installed.
Backtrace:
▆
1. └─kantorovich::kantorovich_CVX(mu, nu, dist = M)
2. └─CVXR::psolve(problem, solver = solver, ...)
3. └─CVXR::solve_via_data(...)
4. ├─S7::S7_dispatch()
5. └─CVXR (local) `method(solve_via_data, CVXR::SolvingChain)`(...)
6. └─CVXR::solve_via_data(...)
7. ├─S7::S7_dispatch()
8. └─CVXR (local) `method(solve_via_data, CVXR::ECOS_Solver)`(...)
9. └─cli::cli_abort("Package {.pkg ECOSolveR} is required but not installed.")
10. └─rlang::abort(...)
Execution halted
re-building of vignette outputs
Error(s) in re-building vignettes:
--- re-building 'kantorovich.Rmd' using rmarkdown
Quitting from kantorovich.Rmd:176-189 [unnamed-chunk-14]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `method(solve_via_data, CVXR::ECOS_Solver)`:
! Package ECOSolveR is required but not installed.
---
Backtrace:
▆
1. └─kantorovich::kantorovich_CVX(mu, nu, dist = M)
2. └─CVXR::psolve(problem, solver = solver, ...)
3. └─CVXR::solve_via_data(...)
4. ├─S7::S7_dispatch()
5. └─CVXR (local) `method(solve_via_data, CVXR::SolvingChain)`(...)
6. └─CVXR::solve_via_data(...)
7. ├─S7::S7_dispatch()
8. └─CVXR (local) `method(solve_via_data, CVXR::ECOS_Solver)`(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'kantorovich.Rmd' failed with diagnostics:
Package ECOSolveR is required but not installed.
--- failed re-building 'kantorovich.Rmd'
SUMMARY: processing the following file failed:
'kantorovich.Rmd'
Error: Vignette re-building failed.
Execution halted
tests
Running 'testthat.R' [7s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(kantorovich)
Warning message:
replacing previous import 'CVXR::outer' by 'gmp::outer' when loading 'kantorovich'
> library(gmp)
Attaching package: 'gmp'
The following objects are masked from 'package:base':
%*%, apply, crossprod, matrix, tcrossprod
>
> test_check("kantorovich")
Saving _problems/test-CVX-6.R
Saving _problems/test-CVX-16.R
Saving _problems/test-CVX-37.R
[ FAIL 3 | WARN 0 | SKIP 0 | PASS 130 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-CVX.R:6:3'): kantorovich_CVX default distance ──────────────────
Error in ``method(solve_via_data, CVXR::ECOS_Solver)`(x = <object>, data = list(c = c(0, 1, 1, 1, 0, 1, 1, 1, 0), A = new("dgCMatrix", i = c(0L, 3L, 6L, 0L, 4L, 7L, 0L, 5L, 8L, 1L, 3L, 9L, 1L, 4L, 10L, 1L, 5L, 11L, 2L, 3L, 12L, 2L, 4L, 13L, 2L, 5L, 14
...[truncated]...
857143, 0.285714285714286, 0.571428571428571, 0.333333333333333, 0.111111111111111, 0.555555555555556, 0, 0, 0, 0, 0, 0, 0, 0, 0), dims = <object>, bool_idx = integer(0), int_idx = integer(0)), warm_start = FALSE, verbose = FALSE, solver_opts = list(), ...)`: Package ECOSolveR is required but not installed.
Backtrace:
▆
1. └─kantorovich::kantorovich_CVX(mu, nu, dist = D) at test-CVX.R:37:3
2. └─CVXR::psolve(problem, solver = solver, ...)
3. └─CVXR::solve_via_data(...)
4. ├─S7::S7_dispatch()
5. └─CVXR (local) `method(solve_via_data, CVXR::SolvingChain)`(...)
6. └─CVXR::solve_via_data(...)
7. ├─S7::S7_dispatch()
8. └─CVXR (local) `method(solve_via_data, CVXR::ECOS_Solver)`(...)
9. └─cli::cli_abort("Package {.pkg ECOSolveR} is required but not installed.")
10. └─rlang::abort(...)
[ FAIL 3 | WARN 0 | SKIP 0 | PASS 130 ]
Error:
! Test failures.
Execution halted
whether package can be installed
Found the following significant warnings: Warning: replacing previous import 'CVXR::outer' by 'gmp::outer' when loading 'kantorovich' See 'd:/Rcompile/CRANpkg/local/4.6/kantorovich.Rcheck/00install.out' for details.
examples
Running examples in 'kantorovich-Ex.R' failed
The error most likely occurred in:
> ### Name: kantorovich_CVX
> ### Title: Computes Kantorovich distance with CVX
> ### Aliases: kantorovich_CVX
>
> ### ** Examples
>
> x <- c(1.5, 2, -3)
> mu <- c(1/7, 2/7, 4/7)
> y <- c(4, 3.5, 0, -2)
> nu <- c(1/4, 1/4, 1/4, 1/4)
> M <- outer(x, y, FUN = function(x, y) abs(x - y))
> kantorovich_CVX(mu, nu, dist = M)
Error in `method(solve_via_data, CVXR::ECOS_Solver)`:
! Package ECOSolveR is required but not installed.
Backtrace:
▆
1. └─kantorovich::kantorovich_CVX(mu, nu, dist = M)
2. └─CVXR::psolve(problem, solver = solver, ...)
3. └─CVXR::solve_via_data(...)
4. ├─S7::S7_dispatch()
5. └─CVXR (local) `method(solve_via_data, CVXR::SolvingChain)`(...)
6. └─CVXR::solve_via_data(...)
7. ├─S7::S7_dispatch()
8. └─CVXR (local) `method(solve_via_data, CVXR::ECOS_Solver)`(...)
9. └─cli::cli_abort("Package {.pkg ECOSolveR} is required but not installed.")
10. └─rlang::abort(...)
Execution halted
re-building of vignette outputs
Error(s) in re-building vignettes:
--- re-building 'kantorovich.Rmd' using rmarkdown
Quitting from kantorovich.Rmd:176-189 [unnamed-chunk-14]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `method(solve_via_data, CVXR::ECOS_Solver)`:
! Package ECOSolveR is required but not installed.
---
Backtrace:
▆
1. └─kantorovich::kantorovich_CVX(mu, nu, dist = M)
2. └─CVXR::psolve(problem, solver = solver, ...)
3. └─CVXR::solve_via_data(...)
4. ├─S7::S7_dispatch()
5. └─CVXR (local) `method(solve_via_data, CVXR::SolvingChain)`(...)
6. └─CVXR::solve_via_data(...)
7. ├─S7::S7_dispatch()
8. └─CVXR (local) `method(solve_via_data, CVXR::ECOS_Solver)`(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'kantorovich.Rmd' failed with diagnostics:
Package ECOSolveR is required but not installed.
--- failed re-building 'kantorovich.Rmd'
SUMMARY: processing the following file failed:
'kantorovich.Rmd'
Error: Vignette re-building failed.
Execution halted
tests
Running 'testthat.R' [9s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(kantorovich)
Warning message:
replacing previous import 'CVXR::outer' by 'gmp::outer' when loading 'kantorovich'
> library(gmp)
Attaching package: 'gmp'
The following objects are masked from 'package:base':
%*%, apply, crossprod, matrix, tcrossprod
>
> test_check("kantorovich")
Saving _problems/test-CVX-6.R
Saving _problems/test-CVX-16.R
Saving _problems/test-CVX-37.R
[ FAIL 3 | WARN 0 | SKIP 0 | PASS 130 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-CVX.R:6:3'): kantorovich_CVX default distance ──────────────────
Error in ``method(solve_via_data, CVXR::ECOS_Solver)`(x = <object>, data = list(c = c(0, 1, 1, 1, 0, 1, 1, 1, 0), A = new("dgCMatrix", i = c(0L, 3L, 6L, 0L, 4L, 7L, 0L, 5L, 8L, 1L, 3L, 9L, 1L, 4L, 10L, 1L, 5L, 11L, 2L, 3L, 12L, 2L, 4L, 13L, 2L, 5L, 14
...[truncated]...
857143, 0.285714285714286, 0.571428571428571, 0.333333333333333, 0.111111111111111, 0.555555555555556, 0, 0, 0, 0, 0, 0, 0, 0, 0), dims = <object>, bool_idx = integer(0), int_idx = integer(0)), warm_start = FALSE, verbose = FALSE, solver_opts = list(), ...)`: Package ECOSolveR is required but not installed.
Backtrace:
▆
1. └─kantorovich::kantorovich_CVX(mu, nu, dist = D) at test-CVX.R:37:3
2. └─CVXR::psolve(problem, solver = solver, ...)
3. └─CVXR::solve_via_data(...)
4. ├─S7::S7_dispatch()
5. └─CVXR (local) `method(solve_via_data, CVXR::SolvingChain)`(...)
6. └─CVXR::solve_via_data(...)
7. ├─S7::S7_dispatch()
8. └─CVXR (local) `method(solve_via_data, CVXR::ECOS_Solver)`(...)
9. └─cli::cli_abort("Package {.pkg ECOSolveR} is required but not installed.")
10. └─rlang::abort(...)
[ FAIL 3 | WARN 0 | SKIP 0 | PASS 130 ]
Error:
! Test failures.
Execution halted
whether package can be installed
Found the following significant warnings: Warning: replacing previous import 'CVXR::outer' by 'gmp::outer' when loading 'kantorovich' See 'd:/Rcompile/CRANpkg/local/4.4/kantorovich.Rcheck/00install.out' for details.
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘kantorovich_ompr.R’
examples
Running examples in ‘kantorovich-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: kantorovich_CVX
> ### Title: Computes Kantorovich distance with CVX
> ### Aliases: kantorovich_CVX
>
> ### ** Examples
>
> x <- c(1.5, 2, -3)
> mu <- c(1/7, 2/7, 4/7)
> y <- c(4, 3.5, 0, -2)
> nu <- c(1/4, 1/4, 1/4, 1/4)
> M <- outer(x, y, FUN = function(x, y) abs(x - y))
> kantorovich_CVX(mu, nu, dist = M)
Error in `method(solve_via_data, CVXR::ECOS_Solver)`:
! Package ECOSolveR is required but not installed.
Backtrace:
▆
1. └─kantorovich::kantorovich_CVX(mu, nu, dist = M)
2. └─CVXR::psolve(problem, solver = solver, ...)
3. └─CVXR::solve_via_data(...)
4. ├─S7::S7_dispatch()
5. └─CVXR (local) `method(solve_via_data, CVXR::SolvingChain)`(...)
6. └─CVXR::solve_via_data(...)
7. ├─S7::S7_dispatch()
8. └─CVXR (local) `method(solve_via_data, CVXR::ECOS_Solver)`(...)
9. └─cli::cli_abort("Package {.pkg ECOSolveR} is required but not installed.")
10. └─rlang::abort(...)
Execution halted
re-building of vignette outputs
Error(s) in re-building vignettes:
...
--- re-building ‘kantorovich.Rmd’ using rmarkdown
Quitting from kantorovich.Rmd:176-189 [unnamed-chunk-14]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `method(solve_via_data, CVXR::ECOS_Solver)`:
! Package ECOSolveR is required but not installed.
---
Backtrace:
▆
1. └─kantorovich::kantorovich_CVX(mu, nu, dist = M)
2. └─CVXR::psolve(problem, solver = solver, ...)
3. └─CVXR::solve_via_data(...)
4. ├─S7::S7_dispatch()
5. └─CVXR (local) `method(solve_via_data, CVXR::SolvingChain)`(...)
6. └─CVXR::solve_via_data(...)
7. ├─S7::S7_dispatch()
8. └─CVXR (local) `method(solve_via_data, CVXR::ECOS_Solver)`(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'kantorovich.Rmd' failed with diagnostics:
Package ECOSolveR is required but not installed.
--- failed re-building ‘kantorovich.Rmd’
SUMMARY: processing the following file failed:
‘kantorovich.Rmd’
Error: Vignette re-building failed.
Execution halted
tests
Running ‘testthat.R’ [8s/9s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(kantorovich)
Warning message:
replacing previous import 'CVXR::outer' by 'gmp::outer' when loading 'kantorovich'
> library(gmp)
Attaching package: 'gmp'
The following objects are masked from 'package:base':
%*%, apply, crossprod, matrix, tcrossprod
>
> test_check("kantorovich")
Saving _problems/test-CVX-6.R
Saving _problems/test-CVX-16.R
Saving _problems/test-CVX-37.R
[ FAIL 3 | WARN 0 | SKIP 0 | PASS 130 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-CVX.R:6:3'): kantorovich_CVX default distance ──────────────────
Error in ``method(solve_via_data, CVXR::ECOS_Solver)`(x = <object>, data = list(c = c(0, 1, 1, 1, 0, 1, 1, 1, 0), A = new("dgCMatrix", i = c(0L, 3L, 6L, 0L, 4L, 7L, 0L, 5L, 8L, 1L, 3L, 9L, 1L, 4L, 10L, 1L, 5L, 11L, 2L, 3L, 12L, 2L, 4L, 13L, 2L, 5L,
...[truncated]...
857143, 0.285714285714286, 0.571428571428571, 0.333333333333333, 0.111111111111111, 0.555555555555556, 0, 0, 0, 0, 0, 0, 0, 0, 0), dims = <object>, bool_idx = integer(0), int_idx = integer(0)), warm_start = FALSE, verbose = FALSE, solver_opts = list(), ...)`: Package ECOSolveR is required but not installed.
Backtrace:
▆
1. └─kantorovich::kantorovich_CVX(mu, nu, dist = D) at test-CVX.R:37:3
2. └─CVXR::psolve(problem, solver = solver, ...)
3. └─CVXR::solve_via_data(...)
4. ├─S7::S7_dispatch()
5. └─CVXR (local) `method(solve_via_data, CVXR::SolvingChain)`(...)
6. └─CVXR::solve_via_data(...)
7. ├─S7::S7_dispatch()
8. └─CVXR (local) `method(solve_via_data, CVXR::ECOS_Solver)`(...)
9. └─cli::cli_abort("Package {.pkg ECOSolveR} is required but not installed.")
10. └─rlang::abort(...)
[ FAIL 3 | WARN 0 | SKIP 0 | PASS 130 ]
Error:
! Test failures.
Execution halted
whether package can be installed
Found the following significant warnings: Warning: replacing previous import ‘CVXR::outer’ by ‘gmp::outer’ when loading ‘kantorovich’ See ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/kantorovich.Rcheck/00install.out’ for details.
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘kantorovich_ompr.R’
examples
Running examples in ‘kantorovich-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: kantorovich_CVX
> ### Title: Computes Kantorovich distance with CVX
> ### Aliases: kantorovich_CVX
>
> ### ** Examples
>
> x <- c(1.5, 2, -3)
> mu <- c(1/7, 2/7, 4/7)
> y <- c(4, 3.5, 0, -2)
> nu <- c(1/4, 1/4, 1/4, 1/4)
> M <- outer(x, y, FUN = function(x, y) abs(x - y))
> kantorovich_CVX(mu, nu, dist = M)
Error in `method(solve_via_data, CVXR::ECOS_Solver)`:
! Package ECOSolveR is required but not installed.
Backtrace:
▆
1. └─kantorovich::kantorovich_CVX(mu, nu, dist = M)
2. └─CVXR::psolve(problem, solver = solver, ...)
3. └─CVXR::solve_via_data(...)
4. ├─S7::S7_dispatch()
5. └─CVXR (local) `method(solve_via_data, CVXR::SolvingChain)`(...)
6. └─CVXR::solve_via_data(...)
7. ├─S7::S7_dispatch()
8. └─CVXR (local) `method(solve_via_data, CVXR::ECOS_Solver)`(...)
9. └─cli::cli_abort("Package {.pkg ECOSolveR} is required but not installed.")
10. └─rlang::abort(...)
Execution halted
re-building of vignette outputs
Error(s) in re-building vignettes:
...
--- re-building ‘kantorovich.Rmd’ using rmarkdown
Quitting from kantorovich.Rmd:176-189 [unnamed-chunk-14]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `method(solve_via_data, CVXR::ECOS_Solver)`:
! Package ECOSolveR is required but not installed.
---
Backtrace:
▆
1. └─kantorovich::kantorovich_CVX(mu, nu, dist = M)
2. └─CVXR::psolve(problem, solver = solver, ...)
3. └─CVXR::solve_via_data(...)
4. ├─S7::S7_dispatch()
5. └─CVXR (local) `method(solve_via_data, CVXR::SolvingChain)`(...)
6. └─CVXR::solve_via_data(...)
7. ├─S7::S7_dispatch()
8. └─CVXR (local) `method(solve_via_data, CVXR::ECOS_Solver)`(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'kantorovich.Rmd' failed with diagnostics:
Package ECOSolveR is required but not installed.
--- failed re-building ‘kantorovich.Rmd’
SUMMARY: processing the following file failed:
‘kantorovich.Rmd’
Error: Vignette re-building failed.
Execution halted
tests
Running ‘testthat.R’ [8s/8s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(kantorovich)
Warning message:
replacing previous import 'CVXR::outer' by 'gmp::outer' when loading 'kantorovich'
> library(gmp)
Attaching package: 'gmp'
The following objects are masked from 'package:base':
%*%, apply, crossprod, matrix, tcrossprod
>
> test_check("kantorovich")
Saving _problems/test-CVX-6.R
Saving _problems/test-CVX-16.R
Saving _problems/test-CVX-37.R
[ FAIL 3 | WARN 0 | SKIP 0 | PASS 130 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-CVX.R:6:3'): kantorovich_CVX default distance ──────────────────
Error in ``method(solve_via_data, CVXR::ECOS_Solver)`(x = <object>, data = list(c = c(0, 1, 1, 1, 0, 1, 1, 1, 0), A = new("dgCMatrix", i = c(0L, 3L, 6L, 0L, 4L, 7L, 0L, 5L, 8L, 1L, 3L, 9L, 1L, 4L, 10L, 1L, 5L, 11L, 2L, 3L, 12L, 2L, 4L, 13L, 2L, 5L,
...[truncated]...
857143, 0.285714285714286, 0.571428571428571, 0.333333333333333, 0.111111111111111, 0.555555555555556, 0, 0, 0, 0, 0, 0, 0, 0, 0), dims = <object>, bool_idx = integer(0), int_idx = integer(0)), warm_start = FALSE, verbose = FALSE, solver_opts = list(), ...)`: Package ECOSolveR is required but not installed.
Backtrace:
▆
1. └─kantorovich::kantorovich_CVX(mu, nu, dist = D) at test-CVX.R:37:3
2. └─CVXR::psolve(problem, solver = solver, ...)
3. └─CVXR::solve_via_data(...)
4. ├─S7::S7_dispatch()
5. └─CVXR (local) `method(solve_via_data, CVXR::SolvingChain)`(...)
6. └─CVXR::solve_via_data(...)
7. ├─S7::S7_dispatch()
8. └─CVXR (local) `method(solve_via_data, CVXR::ECOS_Solver)`(...)
9. └─cli::cli_abort("Package {.pkg ECOSolveR} is required but not installed.")
10. └─rlang::abort(...)
[ FAIL 3 | WARN 0 | SKIP 0 | PASS 130 ]
Error:
! Test failures.
Execution halted
whether package can be installed
Found the following significant warnings: Warning: replacing previous import ‘CVXR::outer’ by ‘gmp::outer’ when loading ‘kantorovich’ See ‘/home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/kantorovich.Rcheck/00install.out’ for details.
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘kantorovich_ompr.R’
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘kantorovich_ompr.R’
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
'kantorovich_ompr.R'
examples
Running examples in 'kantorovich-Ex.R' failed
The error most likely occurred in:
> ### Name: kantorovich_CVX
> ### Title: Computes Kantorovich distance with CVX
> ### Aliases: kantorovich_CVX
>
> ### ** Examples
>
> x <- c(1.5, 2, -3)
> mu <- c(1/7, 2/7, 4/7)
> y <- c(4, 3.5, 0, -2)
> nu <- c(1/4, 1/4, 1/4, 1/4)
> M <- outer(x, y, FUN = function(x, y) abs(x - y))
> kantorovich_CVX(mu, nu, dist = M)
Error in `method(solve_via_data, CVXR::ECOS_Solver)`:
! Package ECOSolveR is required but not installed.
Backtrace:
▆
1. └─kantorovich::kantorovich_CVX(mu, nu, dist = M)
2. └─CVXR::psolve(problem, solver = solver, ...)
3. └─CVXR::solve_via_data(...)
4. ├─S7::S7_dispatch()
5. └─CVXR (local) `method(solve_via_data, CVXR::SolvingChain)`(...)
6. └─CVXR::solve_via_data(...)
7. ├─S7::S7_dispatch()
8. └─CVXR (local) `method(solve_via_data, CVXR::ECOS_Solver)`(...)
9. └─cli::cli_abort("Package {.pkg ECOSolveR} is required but not installed.")
10. └─rlang::abort(...)
Execution halted
re-building of vignette outputs
Error(s) in re-building vignettes:
--- re-building 'kantorovich.Rmd' using rmarkdown
Quitting from kantorovich.Rmd:176-189 [unnamed-chunk-14]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `method(solve_via_data, CVXR::ECOS_Solver)`:
! Package ECOSolveR is required but not installed.
---
Backtrace:
▆
1. └─kantorovich::kantorovich_CVX(mu, nu, dist = M)
2. └─CVXR::psolve(problem, solver = solver, ...)
3. └─CVXR::solve_via_data(...)
4. ├─S7::S7_dispatch()
5. └─CVXR (local) `method(solve_via_data, CVXR::SolvingChain)`(...)
6. └─CVXR::solve_via_data(...)
7. ├─S7::S7_dispatch()
8. └─CVXR (local) `method(solve_via_data, CVXR::ECOS_Solver)`(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'kantorovich.Rmd' failed with diagnostics:
Package ECOSolveR is required but not installed.
--- failed re-building 'kantorovich.Rmd'
SUMMARY: processing the following file failed:
'kantorovich.Rmd'
Error: Vignette re-building failed.
Execution halted
tests
Running 'testthat.R' [7s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(kantorovich)
Warning message:
replacing previous import 'CVXR::outer' by 'gmp::outer' when loading 'kantorovich'
> library(gmp)
Attaching package: 'gmp'
The following objects are masked from 'package:base':
%*%, apply, crossprod, matrix, tcrossprod
>
> test_check("kantorovich")
Saving _problems/test-CVX-6.R
Saving _problems/test-CVX-16.R
Saving _problems/test-CVX-37.R
[ FAIL 3 | WARN 0 | SKIP 0 | PASS 130 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-CVX.R:6:3'): kantorovich_CVX default distance ──────────────────
Error in ``method(solve_via_data, CVXR::ECOS_Solver)`(x = <object>, data = list(c = c(0, 1, 1, 1, 0, 1, 1, 1, 0), A = new("dgCMatrix", i = c(0L, 3L, 6L, 0L, 4L, 7L, 0L, 5L, 8L, 1L, 3L, 9L, 1L, 4L, 10L, 1L, 5L, 11L, 2L, 3L, 12L, 2L, 4L, 13L, 2L, 5L, 14
...[truncated]...
857143, 0.285714285714286, 0.571428571428571, 0.333333333333333, 0.111111111111111, 0.555555555555556, 0, 0, 0, 0, 0, 0, 0, 0, 0), dims = <object>, bool_idx = integer(0), int_idx = integer(0)), warm_start = FALSE, verbose = FALSE, solver_opts = list(), ...)`: Package ECOSolveR is required but not installed.
Backtrace:
▆
1. └─kantorovich::kantorovich_CVX(mu, nu, dist = D) at test-CVX.R:37:3
2. └─CVXR::psolve(problem, solver = solver, ...)
3. └─CVXR::solve_via_data(...)
4. ├─S7::S7_dispatch()
5. └─CVXR (local) `method(solve_via_data, CVXR::SolvingChain)`(...)
6. └─CVXR::solve_via_data(...)
7. ├─S7::S7_dispatch()
8. └─CVXR (local) `method(solve_via_data, CVXR::ECOS_Solver)`(...)
9. └─cli::cli_abort("Package {.pkg ECOSolveR} is required but not installed.")
10. └─rlang::abort(...)
[ FAIL 3 | WARN 0 | SKIP 0 | PASS 130 ]
Error:
! Test failures.
Execution halted
whether package can be installed
Found the following significant warnings: Warning: replacing previous import 'CVXR::outer' by 'gmp::outer' when loading 'kantorovich' See 'd:/Rcompile/CRANpkg/local/4.5/kantorovich.Rcheck/00install.out' for details.
Check History
ERROR 2 OK · 4 NOTE · 0 WARNING · 8 ERROR · 0 FAILURE Mar 10, 2026
CRAN incoming feasibility
Maintainer: ‘Stéphane Laurent <laurent_step@outlook.fr>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Stéphane",
family = "Laurent",
role = c("aut", "cre"),
email = "laurent_step@outlook.fr")
as necessary.
CRAN incoming feasibility
Maintainer: ‘Stéphane Laurent <laurent_step@outlook.fr>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Stéphane",
family = "Laurent",
role = c("aut", "cre"),
email = "laurent_step@outlook.fr")
as necessary.
whether package can be installed
Found the following significant warnings: Warning: replacing previous import ‘CVXR::outer’ by ‘gmp::outer’ when loading ‘kantorovich’ See ‘/data/gannet/ripley/R/packages/tests-clang/kantorovich.Rcheck/00install.out’ for details.
whether package can be installed
Found the following significant warnings: Warning: replacing previous import ‘CVXR::outer’ by ‘gmp::outer’ when loading ‘kantorovich’ See ‘/data/gannet/ripley/R/packages/tests-devel/kantorovich.Rcheck/00install.out’ for details.
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘kantorovich_ompr.R’
whether package can be installed
Found the following significant warnings: Warning: replacing previous import 'CVXR::outer' by 'gmp::outer' when loading 'kantorovich' See 'd:/Rcompile/CRANpkg/local/4.6/kantorovich.Rcheck/00install.out' for details.
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘kantorovich_ompr.R’
whether package can be installed
Found the following significant warnings: Warning: replacing previous import ‘CVXR::outer’ by ‘gmp::outer’ when loading ‘kantorovich’ See ‘/home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/kantorovich.Rcheck/00install.out’ for details.
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘kantorovich_ompr.R’
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘kantorovich_ompr.R’
whether package can be installed
Found the following significant warnings: Warning: replacing previous import 'CVXR::outer' by 'gmp::outer' when loading 'kantorovich' See 'd:/Rcompile/CRANpkg/local/4.5/kantorovich.Rcheck/00install.out' for details.
whether package can be installed
Found the following significant warnings: Warning: replacing previous import 'CVXR::outer' by 'gmp::outer' when loading 'kantorovich' See 'd:/Rcompile/CRANpkg/local/4.4/kantorovich.Rcheck/00install.out' for details.