isoWater
Discovery, Retrieval, and Analysis of Water Isotope Data
v1.2.2
·
May 22, 2026
·
GPL-3
Description
The wiDB...() functions provide an interface to the public API of the wiDB <https://github.com/SPATIAL-Lab/isoWater/blob/master/Protocol.md>: build, check and submit queries, and receive and unpack responses. Data analysis functions support Bayesian inference of the source and source isotope composition of water samples that may have experienced evaporation. Algorithms adapted from Bowen et al. (2018, <doi:10.1007/s00442-018-4192-5>).
Downloads
CRAN
442
Last 30 days
8981st
1K
Last 90 days
3.9K
Last year
Trend: +44.4% (30d vs prior 30d)
r2u
CRAN
17
Last 30 days
31
Last 90 days
113
Last year
Trend: +21.4% (30d vs prior 30d)
autoCRAN
1
Last 7 days
8
Last 30 days
0
All-time
autoCRAN-only: this name is served only by autoCRAN, so the count is exact.
CRAN Check Status
1
ERROR
12
OK
Show all 13 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | OK |
| r-devel-linux-x86_64-debian-gcc | OK |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | ERROR |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (1 non-OK)
ERROR
r-oldrel-macos-arm64
re-building of vignette outputs
Error(s) in re-building vignettes:
--- re-building ‘isoWater.Rmd’ using rmarkdown
2026-06-30 14:13:29.264 R[44076:208881] XType: Using static font registry.
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: ar.yw.default(x, aic = aic, order.max = order.max, na.action = na.action, series = series, ...)
2: ar.yw(x, aic = aic, order.max = order.max, na.action = na.action, series = series, ...)
3: ar(x[, i], aic = TRUE)
4: spectrum0.ar(x)
5: doTryCatch(return(expr), name, parentenv, handler)
6: tryCatchOne(expr, names, parentenv, handlers[[1L]])
7: tryCatchList(expr, classes, parentenv, handlers)
8: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]]
...[truncated]...
vign_test/isoWater", skip = TRUE, ser_elibs = "/Volumes/Temp/tmp/RtmpfE0GT6/file6d813f9eb2f1.rds")
An irrecoverable exception occurred. R is aborting now ...
Warning in file("", "w+b") :
cannot open file '/Volumes/Temp/tmp/Rtmp9UGOrP/Rfac2c151f53f6': No such file or directory
Quitting from isoWater.Rmd:185-190 [mixSource2]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cannot open the connection
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Quitting from isoWater.Rmd:185-190 [mixSource2]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
file("", "w+b")
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'isoWater.Rmd' failed with diagnostics:
cannot open the connection
--- failed re-building ‘isoWater.Rmd’
SUMMARY: processing the following file failed:
‘isoWater.Rmd’
Error: Vignette re-building failed.
Execution halted
Check History
ERROR 11 OK · 0 NOTE · 0 WARNING · 2 ERROR · 0 FAILURE May 18, 2026
ERROR
r-devel-linux-x86_64-debian-gcc
examples
Running examples in ‘isoWater-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: wiDB_data
> ### Title: Obtain data from wiDB using a query
> ### Aliases: wiDB_data
>
> ### ** Examp
...[truncated]...
ata for US precipitation in the 1990s
> vals = wiDB_data(minDate = "1990-01-01", maxDate = "2000-01-01",
+ countries = "US", types = "Precipitation")
Error in strsplit(fn, "=") : non-character argument
Calls: wiDB_data -> strsplit
Execution halted
ERROR
r-devel-linux-x86_64-fedora-clang
examples
Running examples in ‘isoWater-Ex.R’ failed The error most likely occurred in: > ### Name: wiDB_data > ### Title: Obtain data from wiDB using a query > ### Aliases: wiDB_data > > ### ** Examples > > #Download data for US precipitation in the 1990s > vals = wiDB_data(minDate = "1990-01-01", maxDate = "2000-01-01", + countries = "US", types = "Precipitation") Error in strsplit(fn, "=") : non-character argument Calls: wiDB_data -> strsplit Execution halted
OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 30, 2026
ERROR 13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Mar 10, 2026
ERROR
r-devel-macos-arm64
re-building of vignette outputs
Error(s) in re-building vignettes: --- re-building ‘isoWater.Rmd’ using rmarkdown *** caught segfault *** address 0x110, cause 'invalid permissions' Traceback: 1: ar.yw.default(x, aic = aic, order.max = order.max, na.action = na.action, serie ...[truncated]... ~~~~ Error: processing vignette 'isoWater.Rmd' failed with diagnostics: argument of length 0 --- failed re-building ‘isoWater.Rmd’ SUMMARY: processing the following file failed: ‘isoWater.Rmd’ Error: Vignette re-building failed. Execution halted
Dependency Network
Version History
9 tracked
new
1.2.1
Mar 10, 2026
new
1.0.0
Jul 14, 2021