icensmis
Study Design and Data Analysis in the Presence of Error-Prone Diagnostic Tests and Self-Reported Outcomes
Description
We consider studies in which information from error-prone diagnostic tests or self-reports are gathered sequentially to determine the occurrence of a silent event. Using a likelihood-based approach incorporating the proportional hazards assumption, we provide functions to estimate the survival distribution and covariate effects. We also provide functions for power and sample size calculations for this setting. Please refer to Xiangdong Gu, Yunsheng Ma, and Raji Balasubramanian (2015) <doi: 10.1214/15-AOAS810>, Xiangdong Gu and Raji Balasubramanian (2016) <doi: 10.1002/sim.6962>, Xiangdong Gu, Mahlet G Tadesse, Andrea S Foulkes, Yunsheng Ma, and Raji Balasubramanian (2020) <doi: 10.1186/s12911-020-01223-w>.
Downloads
347
Last 30 days
12716th
780
Last 90 days
2.9K
Last year
Trend: +89.6% (30d vs prior 30d)
24
Last 30 days
116
Last 90 days
418
Last year
Trend: -40% (30d vs prior 30d)
3
Last 7 days
10
Last 30 days
1
All-time
autoCRAN-only: this name is served only by autoCRAN, so the count is exact.
CRAN Check Status
Show all 13 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | NOTE |
| r-devel-linux-x86_64-debian-gcc | NOTE |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | OK |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (2 non-OK)
CRAN incoming feasibility
Maintainer: ‘Xiangdong Gu <ustcgxd@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = "Xiangdong",
family = "Gu",
role = c("aut", "cre"),
email = "ustcgxd@gmail.com"),
person(given = "Raji",
family = "Balasubramanian",
role = "aut"))
as necessary.
CRAN incoming feasibility
Maintainer: ‘Xiangdong Gu <ustcgxd@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = "Xiangdong",
family = "Gu",
role = c("aut", "cre"),
email = "ustcgxd@gmail.com"),
person(given = "Raji",
family = "Balasubramanian",
role = "aut"))
as necessary.
Check History
NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Apr 22, 2026
CRAN incoming feasibility
Maintainer: ‘Xiangdong Gu <ustcgxd@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = "Xiangdong",
family = "Gu",
role = c("aut", "cre"),
email = "ustcgxd@gmail.com"),
person(given = "Raji",
family = "Balasubramanian",
role = "aut"))
as necessary.
CRAN incoming feasibility
Maintainer: ‘Xiangdong Gu <ustcgxd@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = "Xiangdong",
family = "Gu",
role = c("aut", "cre"),
email = "ustcgxd@gmail.com"),
person(given = "Raji",
family = "Balasubramanian",
role = "aut"))
as necessary.
ERROR 11 OK · 2 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Apr 18, 2026
CRAN incoming feasibility
Maintainer: ‘Xiangdong Gu <ustcgxd@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = "Xiangdong",
family = "Gu",
role = c("aut", "cre"),
email = "ustcgxd@gmail.com"),
person(given = "Raji",
family = "Balasubramanian",
role = "aut"))
as necessary.
CRAN incoming feasibility
Maintainer: ‘Xiangdong Gu <ustcgxd@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = "Xiangdong",
family = "Gu",
role = c("aut", "cre"),
email = "ustcgxd@gmail.com"),
person(given = "Raji",
family = "Balasubramanian",
role = "aut"))
as necessary.
whether package can be installed
Installation failed. See 'd:/Rcompile/CRANpkg/local/4.6/icensmis.Rcheck/00install.out' for details.
NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
CRAN incoming feasibility
Maintainer: ‘Xiangdong Gu <ustcgxd@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = "Xiangdong",
family = "Gu",
role = c("aut", "cre"),
email = "ustcgxd@gmail.com"),
person(given = "Raji",
family = "Balasubramanian",
role = "aut"))
as necessary.
CRAN incoming feasibility
Maintainer: ‘Xiangdong Gu <ustcgxd@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = "Xiangdong",
family = "Gu",
role = c("aut", "cre"),
email = "ustcgxd@gmail.com"),
person(given = "Raji",
family = "Balasubramanian",
role = "aut"))
as necessary.
Code & tests
Open call graph →Line coverage
–
Expression
–
Tests / Examples
–
Functions
173 9 exported
Complexity
3.4 avg / 31 max
Call network
173 nodes / 181 edges
Test coverage has not been measured for this package yet; nodes fall back to a neutral fill.
Lowest coverage
Per-function coverage is not measured for this package yet.
Code
Structure
Lines of code
5,176
Files
31
Compiled share
47.2%
Has compiled src
Yes
Language breakdown
API
Exported functions
9
Internal functions
43
Recent export changes
Testing & CI
Has tests
Yes
Test-to-code ratio
0.05
testthat edition
–
CI present
No
CI type
[]
PR gated
No
Docs
Return-value doc rate
66.7%
\dontrun example ratio
0%
Roxygen coverage
100%
Has pkgdown
No
NEWS present
No
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
–
Unsafe pattern score
0
Dep constraint coverage
100%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
–
System requirements
–
C++ standard
–
License
GPL (>= 2)
License flags
SPDX valid, OSI approved
History
Versions
10
First release
2012-11-25
Latest release
2021-09-02
Avg cadence
236 days
Cold removal rate
100%
Dep drift
1
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/cran-code-metrics.