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hybridogram

Function that Creates a Heat Map from Hybridization Data

v0.3.2 · May 23, 2021 · GPL-3

Description

Using hybrid data, this package created a vividly colored hybrid heat map. The input is two files which are auto-selected. The first file has three columns, the first two for pairs of species, with the third column for the hybrid experiment code (an integer). The second file is a list of code and their descriptions in two columns. The output is a figure showing the hybrid heat map with a color legend.

Downloads

CRAN

217

Last 30 days

22386th

546

Last 90 days

2.2K

Last year

Trend: +73.6% (30d vs prior 30d)

r2u CRAN

0

Last 30 days

23

Last 90 days

96

Last year

Trend: -100% (30d vs prior 30d)

autoCRAN

0

Last 7 days

6

Last 30 days

0

All-time

autoCRAN-only: this name is served only by autoCRAN, so the count is exact.

CRAN Check Status

2 NOTE
11 OK
Show all 13 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang NOTE
r-devel-linux-x86_64-debian-gcc NOTE
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK
Check details (2 non-OK)
NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Matthew Cserhati <csmatyi@protonmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Matthew",
                    family = "Cserhati",
                    role = c("aut", "cre"),
                    email = "csmatyi@protonmail.com")
as necessary.
NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Matthew Cserhati <csmatyi@protonmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Matthew",
                    family = "Cserhati",
                    role = c("aut", "cre"),
                    email = "csmatyi@protonmail.com")
as necessary.

Check History

NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Matthew Cserhati <csmatyi@protonmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Matthew",
                    family = "Cserhati",
                    role = c("aut", "cre"),
                    email = "csmatyi@protonmail.com")
as necessary.
NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Matthew Cserhati <csmatyi@protonmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Matthew",
                    family = "Cserhati",
                    role = c("aut", "cre"),
                    email = "csmatyi@protonmail.com")
as necessary.

Line coverage

Expression

Tests / Examples

Functions

1 1 exported

Complexity

4 avg / 4 max

Call network

1 nodes / 0 edges

Test coverage has not been measured for this package yet; nodes fall back to a neutral fill.

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Lowest coverage

Per-function coverage is not measured for this package yet.

Code

Structure

Lines of code

177

Files

10

Compiled share

0%

Has compiled src

No

Language breakdown

R 87 (49.2%)Docs 36 (20.3%)Vignettes 54 (30.5%)

API

Exported functions

1

Internal functions

0

Recent export changes

v0.3.0+1 hybridogram

Testing & CI

Has tests

No

Test-to-code ratio

0.00

testthat edition

CI present

No

CI type

[]

PR gated

No

Docs

Return-value doc rate

100%

\dontrun example ratio

0%

Roxygen coverage

100%

Has pkgdown

No

NEWS present

No

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

Unsafe pattern score

0

Dep constraint coverage

0%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

System requirements

C++ standard

License

GPL-3

License flags

SPDX valid, OSI approved

History

Versions

2

First release

2021-05-18

Latest release

2021-05-23

Avg cadence

5 days

Cold removal rate

Dep drift

2

LOC over versions

v0.3.0: 183 LOCv0.3.2: 177 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/cran-code-metrics.

Dependency Network

Dependencies Reverse dependencies pheatmap hybridogram

Version History

3 tracked
new 0.3.2 Mar 10, 2026
updated 0.3.2 ← 0.3.0 diff May 23, 2021
new 0.3.0 May 17, 2021