hwde

Models and Tests for Departure from Hardy-Weinberg Equilibrium and Independence Between Loci

v0.67-3 · Aug 21, 2023 · GPL (>= 2)

Description

Fits models for genotypic disequilibria, as described in Huttley and Wilson (2000) <doi:10.1093/genetics/156.4.2127>, Weir (1996) and Weir and Wilson (1986). Contrast terms are available that account for first order interactions between loci. Also implements, for a single locus in a single population, a conditional exact test for Hardy-Weinberg equilibrium.

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r-oldrel-windows-x86_64	OK	49s
r-patched-linux-x86_64	OK	25.8s
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r-release-windows-x86_64	OK	52s

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NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘John Maindonald <jhmaindonald@gmail.com>’

No Authors@R field in DESCRIPTION.
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  Authors@R: c(person(given = "John",
                      family = "Maindonald",
                      role = c("aut", "cre"),
                      email = "jhmaindonald@gmail.com"),
               person(given = c("with", "\\code{hwexact}", "from", "Randall"),
                      family = "Johnson.",
                      role = "aut"))
as necessary.

NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘John Maindonald <jhmaindonald@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "John",
                      family = "Maindonald",
                      role = c("aut", "cre"),
                      email = "jhmaindonald@gmail.com"),
               person(given = c("with", "\\code{hwexact}", "from", "Randall"),
                      family = "Johnson.",
                      role = "aut"))
as necessary.

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NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘John Maindonald <jhmaindonald@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "John",
                      family = "Maindonald",
                      role = c("aut", "cre"),
                      email = "jhmaindonald@gmail.com"),
               person(given = c("with", "\\code{hwexact}", "from", "Randall"),
                      family = "Johnson.",
                      role = "aut"))
as necessary.

NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘John Maindonald <jhmaindonald@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "John",
                      family = "Maindonald",
                      role = c("aut", "cre"),
                      email = "jhmaindonald@gmail.com"),
               person(given = c("with", "\\code{hwexact}", "from", "Randall"),
                      family = "Johnson.",
                      role = "aut"))
as necessary.

Version History

12 tracked

new 0.67-3 Mar 10, 2026

updated 0.67-3 ← 0.67 diff Aug 20, 2023

updated 0.67 ← 0.66 diff Dec 31, 2015

updated 0.66 ← 0.65 diff Sep 13, 2015

updated 0.65 ← 0.64 diff Aug 5, 2015

updated 0.64 ← 0.63 diff Nov 27, 2013

updated 0.63 ← 0.62 diff Mar 21, 2013

updated 0.62 ← 0.61 diff Oct 28, 2012

updated 0.61 ← 0.5 diff Jan 12, 2009

updated 0.5 ← 0.3 diff Jan 20, 2007

updated 0.3 ← 0.2 diff Oct 9, 2003

new 0.2 Mar 13, 2003