hsphase

Phasing, Pedigree Reconstruction, Sire Imputation and Recombination Events Identification of Half-sib Families Using SNP Data

v3.0.0 · Feb 17, 2026 · GPL-3

CRAN GitHub Mirror

Description

Identification of recombination events, haplotype reconstruction, sire imputation and pedigree reconstruction using half-sib family SNP data.

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CRAN Check Status

4 NOTE

10 OK

Show all 14 flavors

Flavor	Status	Time
r-devel-linux-x86_64-debian-clang	OK	168.2s
r-devel-linux-x86_64-debian-gcc	OK	103.7s
r-devel-linux-x86_64-fedora-clang	NOTE	234.6s
r-devel-linux-x86_64-fedora-gcc	NOTE	267.4s
r-devel-macos-arm64	OK	26s
r-devel-windows-x86_64	OK	275s
r-oldrel-macos-arm64	NOTE	34s
r-oldrel-macos-x86_64	NOTE	172s
r-oldrel-windows-x86_64	OK	283s
r-patched-linux-x86_64	OK	137.4s
r-release-linux-x86_64	OK	135.2s
r-release-macos-arm64	OK	40s
r-release-macos-x86_64	OK	210s
r-release-windows-x86_64	OK	244s

Check details (4 non-OK)

NOTE r-devel-linux-x86_64-fedora-clang

compiled code

File ‘hsphase/libs/hsphase.so’:
  Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’

It is good practice to register native routines and to disable symbol
search.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.

NOTE r-devel-linux-x86_64-fedora-gcc

compiled code

File ‘hsphase/libs/hsphase.so’:
  Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’

It is good practice to register native routines and to disable symbol
search.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.

NOTE r-oldrel-macos-arm64

installed package size

installed size is  5.2Mb
  sub-directories of 1Mb or more:
    doc    1.2Mb
    libs   3.6Mb

NOTE r-oldrel-macos-x86_64

installed package size

installed size is  5.3Mb
  sub-directories of 1Mb or more:
    doc    1.2Mb
    libs   3.7Mb

Check History

NOTE 10 OK · 4 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

NOTE r-devel-linux-x86_64-fedora-clang

compiled code

File ‘hsphase/libs/hsphase.so’:
  Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’

It is good practice to register native routines and to disable symbol
search.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.

NOTE r-devel-linux-x86_64-fedora-gcc

compiled code

File ‘hsphase/libs/hsphase.so’:
  Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’

It is good practice to register native routines and to disable symbol
search.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.

NOTE r-oldrel-macos-arm64

installed package size

installed size is  5.2Mb
  sub-directories of 1Mb or more:
    doc    1.2Mb
    libs   3.6Mb

NOTE r-oldrel-macos-x86_64

installed package size

installed size is  5.3Mb
  sub-directories of 1Mb or more:
    doc    1.2Mb
    libs   3.7Mb

Reverse Dependencies (1)

imports

hsrecombi

Dependency Network

Version History

new 3.0.0 Mar 10, 2026

updated 3.0.0 ← 2.0.4 diff Feb 16, 2026

updated 2.0.4 ← 2.0.3 diff Apr 5, 2025

updated 2.0.3 ← 2.0.2 diff Feb 15, 2024

updated 2.0.2 ← 2.0.1 diff Nov 25, 2018

updated 2.0.1 ← 2.0.0 diff Dec 4, 2016

updated 2.0.0 ← 1.2.6 diff Jun 26, 2014

updated 1.2.6 ← 1.2.5 diff Apr 1, 2014

updated 1.2.5 ← 1.2.4 diff Mar 27, 2014

updated 1.2.4 ← 1.2.3 diff Oct 29, 2013

new 1.2.3 Oct 25, 2013