gestate

Generalised Survival Trial Assessment Tool Environment

v1.6.0 · Apr 26, 2023 · GPL-3

Description

Provides tools to assist planning and monitoring of time-to-event trials under complicated censoring assumptions and/or non-proportional hazards. There are three main components: The first is analytic calculation of predicted time-to-event trial properties, providing estimates of expected hazard ratio, event numbers and power under different analysis methods. The second is simulation, allowing stochastic estimation of these same properties. Thirdly, it provides parametric event prediction using blinded trial data, including creation of prediction intervals. Methods are based upon numerical integration and a flexible object-orientated structure for defining event, censoring and recruitment distributions (Curves).

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13 NOTE

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Flavor	Status	Time
r-devel-linux-x86_64-debian-clang	NOTE	183.5s
r-devel-linux-x86_64-debian-gcc	NOTE	127.4s
r-devel-linux-x86_64-fedora-clang	NOTE	289.3s
r-devel-linux-x86_64-fedora-gcc	NOTE	338.6s
r-devel-windows-x86_64	NOTE	214s
r-oldrel-macos-arm64	NOTE
r-oldrel-macos-x86_64	NOTE	161s
r-oldrel-windows-x86_64	NOTE	296s
r-patched-linux-x86_64	NOTE	171.5s
r-release-linux-x86_64	NOTE
r-release-macos-arm64	NOTE	44s
r-release-macos-x86_64	NOTE	199s
r-release-windows-x86_64	NOTE	215s

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checkRd: (-1) survfit_fast.Rd:21: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly

NOTE r-release-macos-arm64

Rd files

checkRd: (-1) analyse_sim.Rd:47: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:48: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:49: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:50: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:51: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:52: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:53: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:54: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:55: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:56: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:57: Lost braces in \itemize; \value handles \item{}
...[truncated]...
races in \itemize; \value handles \item{}{} directly
checkRd: (-1) summarise_analysis.Rd:47: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summarise_analysis.Rd:48: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summarise_analysis.Rd:49: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:17: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:18: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:20: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:21: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly

NOTE r-release-macos-x86_64

Rd files

checkRd: (-1) analyse_sim.Rd:47: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:48: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:49: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:50: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:51: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:52: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:53: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:54: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:55: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:56: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:57: Lost braces in \itemize; \value handles \item{}
...[truncated]...
races in \itemize; \value handles \item{}{} directly
checkRd: (-1) summarise_analysis.Rd:47: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summarise_analysis.Rd:48: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summarise_analysis.Rd:49: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:17: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:18: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:20: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:21: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly

NOTE r-release-windows-x86_64

Rd files

checkRd: (-1) analyse_sim.Rd:47: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:48: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:49: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:50: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:51: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:52: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:53: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:54: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:55: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:56: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:57: Lost braces in \itemize; \value handles \item{}
...[truncated]...
races in \itemize; \value handles \item{}{} directly
checkRd: (-1) summarise_analysis.Rd:47: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summarise_analysis.Rd:48: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) summarise_analysis.Rd:49: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:17: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:18: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:20: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:21: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly

Check History

NOTE 0 OK · 14 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

NOTE r-devel-linux-x86_64-debian-clang

Rd files

checkRd: (-1) analyse_sim.Rd:47: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:48: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:49: Lost braces in \itemize; \value h
...[truncated]...
d:21: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly

NOTE r-devel-linux-x86_64-debian-gcc

Rd files

checkRd: (-1) analyse_sim.Rd:47: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:48: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:49: Lost braces in \itemize; \value h
...[truncated]...
d:21: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly

NOTE r-devel-linux-x86_64-fedora-clang

Rd files

checkRd: (-1) analyse_sim.Rd:47: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:48: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:49: Lost braces in \itemize; \value h
...[truncated]...
d:21: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly

NOTE r-devel-linux-x86_64-fedora-gcc

Rd files

checkRd: (-1) analyse_sim.Rd:47: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:48: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:49: Lost braces in \itemize; \value h
...[truncated]...
d:21: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly

NOTE r-devel-macos-arm64

Rd files

checkRd: (-1) analyse_sim.Rd:47: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:48: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:49: Lost braces in \itemize; \value h
...[truncated]...
d:21: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly

NOTE r-devel-windows-x86_64

Rd files

checkRd: (-1) analyse_sim.Rd:47: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:48: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:49: Lost braces in \itemize; \value h
...[truncated]...
d:21: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly

NOTE r-patched-linux-x86_64

Rd files

checkRd: (-1) analyse_sim.Rd:47: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:48: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:49: Lost braces in \itemize; \value h
...[truncated]...
d:21: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly

NOTE r-release-linux-x86_64

Rd files

checkRd: (-1) analyse_sim.Rd:47: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:48: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:49: Lost braces in \itemize; \value h
...[truncated]...
d:21: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly

NOTE r-release-macos-arm64

Rd files

checkRd: (-1) analyse_sim.Rd:47: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:48: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:49: Lost braces in \itemize; \value h
...[truncated]...
d:21: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly

NOTE r-release-macos-x86_64

Rd files

checkRd: (-1) analyse_sim.Rd:47: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:48: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:49: Lost braces in \itemize; \value h
...[truncated]...
d:21: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly

NOTE r-release-windows-x86_64

Rd files

checkRd: (-1) analyse_sim.Rd:47: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:48: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:49: Lost braces in \itemize; \value h
...[truncated]...
d:21: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly

NOTE r-oldrel-macos-arm64

Rd files

checkRd: (-1) analyse_sim.Rd:47: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:48: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:49: Lost braces in \itemize; \value h
...[truncated]...
d:21: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly

NOTE r-oldrel-macos-x86_64

Rd files

checkRd: (-1) analyse_sim.Rd:47: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:48: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:49: Lost braces in \itemize; \value h
...[truncated]...
d:21: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly

NOTE r-oldrel-windows-x86_64

Rd files

checkRd: (-1) analyse_sim.Rd:47: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:48: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) analyse_sim.Rd:49: Lost braces in \itemize; \value h
...[truncated]...
d:21: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) survfit_fast.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly

Reverse Dependencies (1)

suggests

eventTrack

Dependency Network

Version History

5 tracked

new 1.6.0 Mar 10, 2026

updated 1.6.0 ← 1.5.0 diff Apr 25, 2023

updated 1.5.0 ← 1.4.0 diff Nov 23, 2021

updated 1.4.0 ← 1.3.2 diff Feb 19, 2020

new 1.3.2 Apr 25, 2019

People

James Bell author maintainer
Jasmin Ruehl contributor

Available on

CRAN r2u Bioconductor autoCRAN COPR

Dependencies

Depends

R (>= 4.0.0)

Imports

foreach doParallel shiny shinythemes survivalmethods

Suggests

testthat knitr rmarkdown

Compilation

No compilation needed

First Published

Apr 25, 2019

First appeared in R 3.6.0 · current R 4.6.1

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CRAN Checks

View on CRAN →