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genie

Fast, Robust, and Outlier Resistant Hierarchical Clustering

v1.0.7 · Mar 2, 2026 · GPL (>= 3)

Description

Implements a basic version of the hierarchical clustering algorithm 'Genie' which links two point groups in such a way that an inequity measure (namely, the Gini index) of the cluster sizes does not significantly increase above a given threshold. This method most often outperforms many other data segmentation approaches in terms of clustering quality as tested on a wide range of benchmark datasets. At the same time, Genie retains the high speed of the single linkage approach, therefore it is also suitable for analysing larger data sets. For more details see (Gagolewski et al. 2016 <DOI:10.1016/j.ins.2016.05.003>). For a faster and more feature-rich implementation, see the 'genieclust' package (Gagolewski, 2021 <DOI:10.1016/j.softx.2021.100722>).

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r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Apr 22, 2026
ERROR 13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Apr 18, 2026
ERROR r-devel-windows-x86_64

whether package can be installed

Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.6/genie.Rcheck/00install.out' for details.
OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Reverse Dependencies (1)

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Dependency Network

Dependencies Reverse dependencies genieclust Rcpp FCPS genie

Version History

7 tracked
new 1.0.7 Mar 10, 2026
updated 1.0.7 ← 1.0.6 diff Mar 1, 2026
updated 1.0.6 ← 1.0.5 diff Nov 30, 2025
updated 1.0.5 ← 1.0.4 diff Aug 2, 2020
updated 1.0.4 ← 1.0.2 diff Apr 26, 2017
updated 1.0.2 ← 1.0.0 diff May 24, 2016
new 1.0.0 Mar 6, 2016