detectRUNS

Detect Runs of Homozygosity and Runs of Heterozygosity in Diploid Genomes

v0.9.6 · Oct 24, 2019 · GPL-3

Description

Detection of runs of homozygosity and of heterozygosity in diploid genomes using two methods: sliding windows (Purcell et al (2007) <doi:10.1086/519795>) and consecutive runs (Marras et al (2015) <doi:10.1111/age.12259>).

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CRAN Check Status

13 OK

Show all 13 flavors

Flavor	Status	Time
r-devel-linux-x86_64-debian-clang	OK	127.8s
r-devel-linux-x86_64-debian-gcc	OK	89.7s
r-devel-linux-x86_64-fedora-clang	OK	195.4s
r-devel-linux-x86_64-fedora-gcc	OK	228.3s
r-devel-windows-x86_64	OK	174s
r-oldrel-macos-arm64	OK
r-oldrel-macos-x86_64	OK	105s
r-oldrel-windows-x86_64	OK	220s
r-patched-linux-x86_64	OK	122.1s
r-release-linux-x86_64	OK
r-release-macos-arm64	OK	36s
r-release-macos-x86_64	OK	141s
r-release-windows-x86_64	OK	171s

Check History

OK 12 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Apr 25, 2026

NOTE 11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Apr 22, 2026

NOTE r-oldrel-macos-arm64

installed package size

installed size is  5.2Mb
  sub-directories of 1Mb or more:
    extdata   2.1Mb
    libs      2.3Mb

NOTE r-oldrel-macos-x86_64

installed package size

installed size is  5.2Mb
  sub-directories of 1Mb or more:
    extdata   2.1Mb
    libs      2.3Mb

NOTE r-oldrel-windows-x86_64

LazyData

'LazyData' is specified without a 'data' directory

ERROR 10 OK · 3 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Apr 18, 2026

ERROR r-devel-windows-x86_64

whether package can be installed

Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.6/detectRUNS.Rcheck/00install.out' for details.

NOTE r-oldrel-macos-arm64

installed package size

installed size is  5.2Mb
  sub-directories of 1Mb or more:
    extdata   2.1Mb
    libs      2.3Mb

NOTE r-oldrel-macos-x86_64

installed package size

installed size is  5.2Mb
  sub-directories of 1Mb or more:
    extdata   2.1Mb
    libs      2.3Mb

NOTE r-oldrel-windows-x86_64

LazyData

'LazyData' is specified without a 'data' directory

NOTE 11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

NOTE r-oldrel-macos-arm64

installed package size

installed size is  5.2Mb
  sub-directories of 1Mb or more:
    extdata   2.1Mb
    libs      2.3Mb

NOTE r-oldrel-macos-x86_64

installed package size

installed size is  5.2Mb
  sub-directories of 1Mb or more:
    extdata   2.1Mb
    libs      2.3Mb

NOTE r-oldrel-windows-x86_64

LazyData

'LazyData' is specified without a 'data' directory

Reverse Dependencies (1)

suggests

tidypopgen

Dependency Network

Version History

3 tracked

new 0.9.6 Mar 10, 2026

updated 0.9.6 ← 0.9.5 diff Oct 23, 2019

new 0.9.5 Feb 5, 2018