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dendroextras

Extra Functions to Cut, Label and Colour Dendrogram Clusters

v0.2.3 · Jan 25, 2018 · GPL (>= 2)

Description

Provides extra functions to manipulate dendrograms that build on the base functions provided by the 'stats' package. The main functionality it is designed to add is the ability to colour all the edges in an object of class 'dendrogram' according to cluster membership i.e. each subtree is coloured, not just the terminal leaves. In addition it provides some utility functions to cut 'dendrogram' and 'hclust' objects and to set/get labels.

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r2u CRAN

3

Last 30 days

28

Last 90 days

110

Last year

Trend: -66.7% (30d vs prior 30d)

autoCRAN

1

Last 7 days

7

Last 30 days

0

All-time

autoCRAN-only: this name is served only by autoCRAN, so the count is exact.

CRAN Check Status

2 NOTE
11 OK
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r-devel-linux-x86_64-debian-clang NOTE
r-devel-linux-x86_64-debian-gcc NOTE
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK
Check details (2 non-OK)
NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Gregory Jefferis <jefferis@gmail.com>’

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘dendroextras-package.Rd’:
    \keyword{package,}
NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Gregory Jefferis <jefferis@gmail.com>’

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘dendroextras-package.Rd’:
    \keyword{package,}

Check History

NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Gregory Jefferis <jefferis@gmail.com>’

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘dendroextras-package.Rd’:
    \keyword{package,}
NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Gregory Jefferis <jefferis@gmail.com>’

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘dendroextras-package.Rd’:
    \keyword{package,}

Code

Structure

Lines of code

737

Files

20

Compiled share

0%

Has compiled src

No

Language breakdown

R 311 (42.2%)Tests 151 (20.5%)Docs 275 (37.3%)

API

Exported functions

7

Internal functions

3

Recent export changes

v0.1-4+3 color_clusters, set_leaf_colors, set_leaf_colours

Testing & CI

Has tests

Yes

Test-to-code ratio

0.49

testthat edition

CI present

No

CI type

[]

PR gated

No

Docs

Return-value doc rate

80%

\dontrun example ratio

0%

Roxygen coverage

100%

Has pkgdown

No

NEWS present

Yes

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

0%

Unsafe pattern score

0

Dep constraint coverage

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

System requirements

C++ standard

License

GPL (>= 2)

License flags

SPDX valid, OSI approved

History

Versions

6

First release

2013-01-03

Latest release

2018-01-25

Avg cadence

250 days

Cold removal rate

Dep drift

0

LOC over versions

v0.1-2: 441 LOCv0.1-4: 527 LOCv0.2: 580 LOCv0.2.1: 580 LOCv0.2.2: 594 LOCv0.2.3: 737 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/cran-code-metrics.

Reverse Dependencies (3)

Dependency Network

Dependencies Reverse dependencies biplotbootGUI multibiplotGUI nat.nblast dendroextras

Version History

7 tracked
new 0.2.3 Mar 10, 2026
updated 0.2.3 ← 0.2.2 diff Jan 24, 2018
updated 0.2.2 ← 0.2.1 diff May 19, 2017
updated 0.2.1 ← 0.2 diff Aug 4, 2014
updated 0.2 ← 0.1-4 diff Jun 7, 2014
updated 0.1-4 ← 0.1-2 diff Mar 2, 2014
new 0.1-2 Feb 6, 2013