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dartR.captive

Analysing 'SNP' Data to Support Captive Breeding

v1.2.2 · Mar 17, 2026 · GPL (>= 3)

Description

Functions are provided that facilitate the analysis of SNP (single nucleotide polymorphism) data to answer questions regarding captive breeding and relatedness between individuals. 'dartR.captive' is part of the 'dartRverse' suit of packages. Gruber et al. (2018) <doi:10.1111/1755-0998.12745>. Mijangos et al. (2022) <doi:10.1111/2041-210X.13918>.

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CRAN Check Status

2 ERROR
12 OK
Show all 14 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 ERROR
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 ERROR
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK
Check details (2 non-OK)
ERROR r-oldrel-macos-arm64

whether package can be installed

Installation failed.
See ‘/Volumes/Builds/packages/big-sur-arm64/results/4.4/dartR.captive.Rcheck/00install.out’ for details.
ERROR r-release-macos-arm64

whether package can be installed

Installation failed.
See ‘/Volumes/Builds/packages/big-sur-arm64/results/4.5/dartR.captive.Rcheck/00install.out’ for details.

Check History

ERROR 10 OK · 0 NOTE · 3 WARNING · 1 ERROR · 0 FAILURE Mar 17, 2026
WARNING r-devel-linux-x86_64-debian-clang

whether package can be installed

Found the following significant warnings:
  Warning: replacing previous import ‘adegenet::glMean’ by ‘dartR.base::glMean’ when loading ‘dartR.captive’
  Warning: replacing previous import ‘adegenet::glSum’ by ‘dartR.base::glSum’ when loading ‘dartR.captive’
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/dartR.captive.Rcheck/00install.out’ for details.
WARNING r-release-linux-x86_64

whether package can be installed

Found the following significant warnings:
  Warning: replacing previous import ‘adegenet::glMean’ by ‘dartR.base::glMean’ when loading ‘dartR.captive’
  Warning: replacing previous import ‘adegenet::glSum’ by ‘dartR.base::glSum’ when loading ‘dartR.captive’
See ‘/home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/dartR.captive.Rcheck/00install.out’ for details.
ERROR r-oldrel-macos-arm64

whether package can be installed

Installation failed.
See ‘/Volumes/Builds/packages/big-sur-arm64/results/4.4/dartR.captive.Rcheck/00install.out’ for details.
WARNING r-oldrel-windows-x86_64

whether package can be installed

Found the following significant warnings:
  Warning: replacing previous import 'adegenet::glMean' by 'dartR.base::glMean' when loading 'dartR.captive'
  Warning: replacing previous import 'adegenet::glSum' by 'dartR.base::glSum' when loading 'dartR.captive'
See 'd:/Rcompile/CRANpkg/local/4.4/dartR.captive.Rcheck/00install.out' for details.
WARNING 12 OK · 0 NOTE · 2 WARNING · 0 ERROR · 0 FAILURE Mar 12, 2026
WARNING r-devel-linux-x86_64-fedora-clang

whether package can be installed

Found the following significant warnings:
  Warning: replacing previous import ‘adegenet::glMean’ by ‘dartR.base::glMean’ when loading ‘dartR.captive’
  Warning: replacing previous import ‘adegenet::glSum’ by ‘dartR.base::glSum’ when loading ‘dartR.captive’
See ‘/data/gannet/ripley/R/packages/tests-clang/dartR.captive.Rcheck/00install.out’ for details.
WARNING r-devel-linux-x86_64-fedora-gcc

whether package can be installed

Found the following significant warnings:
  Warning: replacing previous import ‘adegenet::glMean’ by ‘dartR.base::glMean’ when loading ‘dartR.captive’
  Warning: replacing previous import ‘adegenet::glSum’ by ‘dartR.base::glSum’ when loading ‘dartR.captive’
See ‘/data/gannet/ripley/R/packages/tests-devel/dartR.captive.Rcheck/00install.out’ for details.
OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Reverse Dependencies (1)

suggests

Dependency Network

Dependencies Reverse dependencies dartR.base dartR.data dartR.sim adegenet crayon ggplot2 patchwork stringr data.table gridExtra magrittr reshape2 tidyr digest dartRverse dartR.captive

Version History

updated 1.2.2 ← 1.0.2 diff Mar 17, 2026
new 1.0.2 Mar 10, 2026
updated 1.0.2 ← 0.75 diff Feb 17, 2025
new 0.75 Nov 26, 2023