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dPCP

Automated Analysis of Multiplex Digital PCR Data

v2.0.1 · Aug 12, 2023 · MIT + file LICENSE

Description

The automated clustering and quantification of the digital PCR data is based on the combination of 'DBSCAN' (Hahsler et al. (2019) <doi:10.18637/jss.v091.i01>) and 'c-means' (Bezdek et al. (1981) <doi:10.1007/978-1-4757-0450-1>) algorithms. The analysis is independent of multiplexing geometry, dPCR system, and input amount. The details about input data and parameters are available in the vignette.

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r-patched-linux-x86_64 OK
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Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Dependency Network

Dependencies Reverse dependencies cluster dbscan e1071 exactci ggplot2 ggpubr raster rlist scales shiny shinyjs stringr dPCP

Version History

new 2.0.1 Mar 10, 2026
updated 2.0.1 ← 2.0.0 diff Aug 11, 2023
updated 2.0.0 ← 1.0.4 diff Dec 14, 2022
updated 1.0.4 ← 1.0.3 diff Jul 28, 2021
new 1.0.3 Sep 24, 2020