curvHDR

1.2-2

Filtering of Flow Cytometry Samples

0packages depend

3Kdownloads / year

–test coverage

13/13checks pass

Overview

About

Maintained by Matt WandFirst published 2010-11-177 releasesCRAN page ↗

Filtering, also known as gating, of flow cytometry samples using the curvHDR method, which is described in Naumann, U., Luta, G. and Wand, M.P. (2010) DOI:10.1186/1471-2105-11-44.

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("curvHDR", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-curvhdr

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-curvHDR

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-curvHDR

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 2.8 min · r-devel-linux-x86_64-fedora-gcc

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

Yes

Vignettes

README

Dependencies · direct

Check history

OK2026-04-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-04-09
13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Downloads

CRAN downloads in the past year

Rank #13,211 · ~8/day · ~248/mo

curvHDR Releases R versions

Daily download trend is not available in this view yet.

36630 days

81390 days

3K1 year

Compare downloads with other packages →

Also on423 r2u15 autocran

Dependencies

Declared dependencies

7 external dependencies (excludes base and recommended)

Depends (0)

none

Imports (8)

feature geometry hdrcde ks misc3d ptinpoly rglKernSmooth

LinkingTo (0)

none

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

Code Composition

R 1,409 (78%)Rd 239 (13%)C 153 (8%)Vignettes 16 (1%)

Code characteristics

Object systems

S31

Cyclomatic complexity: 2.0 median / 89 max
Documented parameters: 100%

Test coverage

Line coverage

–

Expression

–

Tests / Examples

–

Functions

25 2 exported

Complexity

10.3 avg / 89 max

Call network

25 nodes / 22 edges

Test coverage has not been measured for this package yet; nodes fall back to a neutral fill.

Call graph

Open call graph →

Loading call graph…

Lowest coverage

Per-function coverage is not measured for this package yet.

People & History

People (7)

Maintainer (1)

Matt Wand

Author, Maintainer

Authors (3)

Matt Wand

Author, Maintainer

George Luta

Author

Ulrike Naumann

Author

Contributors (4)

Contributor

Contributor

Contributor

Contributor

Release timeline

7 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
1.2-2Latest
2023-05-29 · current release · diff ↗
R
R 4.3.0 released · 2023-04-21
1.2-1.1
2022-11-21 · diff ↗
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
R
R 4.0.0 released · 2020-04-24
R
R 3.6.0 released · 2019-04-26
1.2-1
2019-01-09 · diff ↗
R
R 3.5.0 released · 2018-04-23
R
R 3.4.0 released · 2017-04-21
1.2-0
2017-04-16 · diff ↗
R
R 3.3.0 released · 2016-05-03
1.1-0
2016-03-14 · diff ↗

Show 9 earlier events

R
R 3.2.0 released · 2015-04-16
R
R 3.1.0 released · 2014-04-10
R
R 3.0.0 released · 2013-04-03
R
R 2.15.0 released · 2012-03-30
1.0-3
2011-12-23 · diff ↗
R
R 2.14.0 released · 2011-10-31
R
R 2.13.0 released · 2011-04-13
1.0-1
2010-11-17
R
R 2.12.0 released · 2010-10-15

Package metadata

First published: 2010-11-17
Total releases: 7 / 16 yrs
License: GPL (>= 2) OSI
Download size: 1.1 MB
Installed size: not tracked yet
With dependencies: not tracked yet