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coloc

Colocalisation Tests of Two Genetic Traits

v5.2.3 · Oct 3, 2023 · GPL
CRAN GitHub Mirror

Description

Performs the colocalisation tests described in Giambartolomei et al (2013) <doi:10.1371/journal.pgen.1004383>, Wallace (2020) <doi:10.1371/journal.pgen.1008720>, Wallace (2021) <doi:10.1371/journal.pgen.1009440>.

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CRAN Check Status

14 OK
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Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Reverse Dependencies (3)

imports

RapidoPGS colocPropTest cophescan

Dependency Network

Dependencies Reverse dependencies data.table ggplot2 viridis susieR RapidoPGS colocPropTest cophescan coloc

Version History

new 5.2.3 Mar 10, 2026
updated 5.2.3 ← 5.2.2 diff Oct 2, 2023
updated 5.2.2 ← 5.1.0.1 diff May 12, 2023
updated 5.1.0.1 ← 5.1.0 diff Jul 4, 2022
updated 5.1.0 ← 3.2-1 diff Jun 13, 2021
updated 3.2-1 ← 3.1 diff May 16, 2019
updated 3.1 ← 2.3-1 diff Feb 23, 2018
updated 2.3-1 ← 2.3 diff Sep 28, 2013
updated 2.3 ← 2.2 diff Sep 24, 2013
updated 2.2 ← 2.1 diff Jun 18, 2013
updated 2.1 ← 2.0 diff Jun 2, 2013
updated 2.0 ← 1.11 diff May 22, 2013
updated 1.11 ← 1.10 diff Jan 24, 2013
updated 1.10 ← 1.08 diff Nov 29, 2012
updated 1.08 ← 1.07 diff Apr 11, 2012
updated 1.07 ← 1.05 diff Feb 21, 2012
new 1.05 Jan 3, 2012