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cmmr

CEU Mass Mediator RESTful API

v1.0.3 · Oct 4, 2024 · GPL-3

Description

CEU (CEU San Pablo University) Mass Mediator is an on-line tool for aiding researchers in performing metabolite annotation. 'cmmr' (CEU Mass Mediator RESTful API) allows for programmatic access in R: batch search, batch advanced search, MS/MS (tandem mass spectrometry) search, etc. For more information about the API Endpoint please go to <https://github.com/YaoxiangLi/cmmr>.

Downloads

CRAN

269

Last 30 days

18037th

639

Last 90 days

2.4K

Last year

Trend: +68.1% (30d vs prior 30d)

r2u CRAN

0

Last 30 days

28

Last 90 days

154

Last year

Trend: -100% (30d vs prior 30d)

autoCRAN

0

Last 7 days

6

Last 30 days

0

All-time

autoCRAN-only: this name is served only by autoCRAN, so the count is exact.

CRAN Check Status

13 OK
Show all 13 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Code

Structure

Lines of code

1,004

Files

22

Compiled share

0%

Has compiled src

No

Language breakdown

R 525 (52.3%)Tests 82 (8.2%)Docs 397 (39.5%)

API

Exported functions

6

Internal functions

1

Recent export changes

v0.1.2+6 advanced_batch_search, batch_search, create_advanced_batch_body +3 more

Testing & CI

Has tests

Yes

Test-to-code ratio

0.16

testthat edition

CI present

No

CI type

[]

PR gated

No

Docs

Return-value doc rate

100%

\dontrun example ratio

75%

Roxygen coverage

100%

Has pkgdown

No

NEWS present

No

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

Unsafe pattern score

0

Dep constraint coverage

0%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

4.4.0

System requirements

C++ standard

License

GPL-3

License flags

SPDX valid, OSI approved

History

Versions

2

First release

2019-04-16

Latest release

2024-10-04

Avg cadence

1998 days

Cold removal rate

Dep drift

1

LOC over versions

v0.1.2: 1,062 LOCv1.0.3: 1,004 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/cran-code-metrics.

Dependency Network

Dependencies Reverse dependencies httr progress RJSONIO cli cmmr

Version History

3 tracked
new 1.0.3 Mar 10, 2026
updated 1.0.3 ← 0.1.2 diff Oct 3, 2024
new 0.1.2 Apr 15, 2019