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clinpubr

Clinical Publication

v1.4.0 · May 24, 2026 · MIT + file LICENSE

Description

Accelerate the process from clinical data to medical publication, including clinical data cleaning, significant result screening, and the generation of publish-ready tables and figures.

Downloads

CRAN

464

Last 30 days

8976th

1K

Last 90 days

4.1K

Last year

Trend: +45.9% (30d vs prior 30d)

r2u CRAN

3

Last 30 days

41

Last 90 days

231

Last year

Trend: -86.4% (30d vs prior 30d)

autoCRAN

2

Last 7 days

10

Last 30 days

0

All-time

autoCRAN-only: this name is served only by autoCRAN, so the count is exact.

CRAN Check Status

13 OK
Show all 13 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Jun 9, 2026
ERROR 12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Jun 8, 2026
ERROR r-devel-linux-x86_64-debian-gcc

package dependencies

Packages required but not available:
  'car', 'DescTools', 'Hmisc', 'rms', 'survminer'

Packages suggested but not available for checking:
  'caret', 'geepack', 'rstatix', 'tableone', 'timeROC'

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
OK 13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE May 2, 2026
ERROR 11 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Apr 25, 2026
ERROR r-release-macos-x86_64

whether package can be installed

Installation failed.
See ‘/Volumes/Builds/packages/big-sur-x86_64/results/4.6/clinpubr.Rcheck/00install.out’ for details.
OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Code

Structure

Lines of code

17,987

Files

200

Compiled share

0%

Has compiled src

No

Language breakdown

R 8,411 (46.8%)Tests 4,199 (23.3%)Docs 3,449 (19.2%)Vignettes 1,928 (10.7%)

API

Exported functions

68

Internal functions

49

Recent export changes

v1.4.0+2 auto_encoding_repair, merge_by_range
v1.3.0+3 keep_by_keyword, screen_data_list, to_wide

Testing & CI

Has tests

Yes

Test-to-code ratio

0.87

testthat edition

3

CI present

No

CI type

[]

PR gated

No

Docs

Return-value doc rate

98.4%

\dontrun example ratio

0%

Roxygen coverage

100%

Has pkgdown

No

NEWS present

Yes

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

100%

Unsafe pattern score

0

Dep constraint coverage

0%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

System requirements

C++ standard

License

MIT + file LICENSE

License flags

SPDX valid, OSI approved

History

Versions

7

First release

2025-06-23

Latest release

2026-05-24

Avg cadence

58 days

Cold removal rate

Dep drift

8

LOC over versions

v1.0.1: 8,069 LOCv1.0.2: 8,789 LOCv1.1.0: 9,887 LOCv1.1.1: 10,298 LOCv1.2.0: 11,749 LOCv1.3.0: 13,762 LOCv1.4.0: 17,987 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/cran-code-metrics.

Dependency Network

Dependencies Reverse dependencies broom car data.table DescTools dplyr fBasics forestploter ggplot2 Hmisc rlang rms stringi stringr survival survminer +1 more dependencies clinpubr

Version History

8 tracked
updated 1.4.0 ← 1.3.0 diff May 24, 2026
new 1.3.0 Mar 10, 2026
updated 1.3.0 ← 1.2.0 diff Mar 6, 2026
updated 1.2.0 ← 1.1.1 diff Jan 7, 2026
updated 1.1.1 ← 1.1.0 diff Dec 18, 2025
updated 1.1.0 ← 1.0.2 diff Oct 29, 2025
updated 1.0.2 ← 1.0.1 diff Aug 18, 2025
new 1.0.1 Jun 22, 2025