clinUtils
General Utility Functions for Analysis of Clinical Data
v0.2.2
·
Dec 4, 2025
·
MIT + file LICENSE
Description
Utility functions to facilitate the import, the reporting and analysis of clinical data. Example datasets in 'SDTM' and 'ADaM' format, containing a subset of patients/domains from the 'CDISC Pilot 01 study' are also available as R datasets to demonstrate the package functionalities.
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CRAN Check Status
1
ERROR
3
NOTE
10
OK
Show all 14 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | OK |
| r-devel-linux-x86_64-debian-gcc | OK |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-macos-arm64 | ERROR |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | NOTE |
| r-oldrel-macos-x86_64 | NOTE |
| r-oldrel-windows-x86_64 | NOTE |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (4 non-OK)
ERROR
r-devel-macos-arm64
re-building of vignette outputs
Error(s) in re-building vignettes:
--- re-building ‘clinUtils-vignette.Rmd’ using rmarkdown
Quitting from clinUtils-vignette.Rmd:441-448 [figure-interactive-creation]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `curl::curl_download()`:
! Timeout was reached [cdn.plot.ly]:
Resolving timed out after 10004 milliseconds
---
Backtrace:
▆
1. ├─base::sapply(...)
2. │ └─base::lapply(X = X, FUN = FUN, ...)
3. │ └─global FUN(X[[i]], ...)
4. │ └─ggplotly(ggplot) %>% partial_bundle()
5. ├─plotly::partial_bundle(.)
6. │ ├─plotly::plotly_build(p)
7. │ └─plotly:::plotly_build.plotly(p)
8. │ └─plotly:::verify_partial_bundle(p)
9. │ └─curl::curl_download(...)
10. └─curl:::raise_libcurl_error(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'clinUtils-vignette.Rmd' failed with diagnostics:
Timeout was reached [cdn.plot.ly]:
Resolving timed out after 10004 milliseconds
--- failed re-building ‘clinUtils-vignette.Rmd’
SUMMARY: processing the following file failed:
‘clinUtils-vignette.Rmd’
Error: Vignette re-building failed.
Execution halted
NOTE
r-oldrel-macos-arm64
installed package size
installed size is 7.7Mb
sub-directories of 1Mb or more:
doc 6.6Mb
NOTE
r-oldrel-macos-x86_64
installed package size
installed size is 7.7Mb
sub-directories of 1Mb or more:
doc 6.6Mb
NOTE
r-oldrel-windows-x86_64
installed package size
installed size is 7.7Mb
sub-directories of 1Mb or more:
doc 6.6Mb
Check History
ERROR 10 OK · 3 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Mar 30, 2026
ERROR
r-devel-macos-arm64
re-building of vignette outputs
Error(s) in re-building vignettes: --- re-building ‘clinUtils-vignette.Rmd’ using rmarkdown Quitting from clinUtils-vignette.Rmd:441-448 [figure-interactive-creation] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ < ...[truncated]... t was reached [cdn.plot.ly]: Resolving timed out after 10004 milliseconds --- failed re-building ‘clinUtils-vignette.Rmd’ SUMMARY: processing the following file failed: ‘clinUtils-vignette.Rmd’ Error: Vignette re-building failed. Execution halted
NOTE
r-oldrel-macos-arm64
installed package size
installed size is 7.7Mb
sub-directories of 1Mb or more:
doc 6.6Mb
NOTE
r-oldrel-macos-x86_64
installed package size
installed size is 7.7Mb
sub-directories of 1Mb or more:
doc 6.6Mb
NOTE
r-oldrel-windows-x86_64
installed package size
installed size is 7.7Mb
sub-directories of 1Mb or more:
doc 6.6Mb
NOTE 11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
NOTE
r-oldrel-macos-arm64
installed package size
installed size is 7.7Mb
sub-directories of 1Mb or more:
doc 6.6Mb
NOTE
r-oldrel-macos-x86_64
installed package size
installed size is 7.7Mb
sub-directories of 1Mb or more:
doc 6.6Mb
NOTE
r-oldrel-windows-x86_64
installed package size
installed size is 7.7Mb
sub-directories of 1Mb or more:
doc 6.6Mb
Reverse Dependencies (3)
Dependency Network
Version History
new
0.2.2
Mar 10, 2026
new
0.0.1
Jun 7, 2021