blastar
BLAST and Sequence Analysis Tools
Description
Description: Provides streamlined tools for retrieving sequences from NCBI, performing sequence alignments (pairwise and multiple), and building phylogenetic trees. Implements the Needleman-Wunsch algorithm for global alignment (Needleman & Wunsch (1970) <doi:10.1016/0022-2836(70)90057-4>), Smith-Waterman for local alignment (Smith & Waterman (1981) <doi:10.1016/0022-2836(81)90087-5>), and Neighbor-Joining for tree construction (Saitou & Nei (1987) <doi:10.1093/oxfordjournals.molbev.a040454>).
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CRAN Check Status
Show all 14 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | ERROR |
| r-devel-linux-x86_64-debian-gcc | ERROR |
| r-devel-linux-x86_64-fedora-clang | ERROR |
| r-devel-linux-x86_64-fedora-gcc | ERROR |
| r-devel-macos-arm64 | ERROR |
| r-devel-windows-x86_64 | ERROR |
| r-oldrel-macos-arm64 | NOTE |
| r-oldrel-macos-x86_64 | NOTE |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | ERROR |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (9 non-OK)
whether package can be installed
Installation failed. See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/blastar.Rcheck/00install.out’ for details.
whether package can be installed
Installation failed. See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/blastar.Rcheck/00install.out’ for details.
whether package can be installed
Installation failed. See ‘/data/gannet/ripley/R/packages/tests-clang/blastar.Rcheck/00install.out’ for details.
whether package can be installed
Installation failed. See ‘/data/gannet/ripley/R/packages/tests-devel/blastar.Rcheck/00install.out’ for details.
whether package can be installed
Installation failed. See ‘/Volumes/Builds/packages/sonoma-arm64/results/4.6/blastar.Rcheck/00install.out’ for details.
whether package can be installed
Installation failed. See 'd:/Rcompile/CRANpkg/local/4.6/blastar.Rcheck/00install.out' for details.
package dependencies
Package suggested but not available for checking: ‘msa’
package dependencies
Package suggested but not available for checking: ‘pwalign’
whether package can be installed
Installation failed. See ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/blastar.Rcheck/00install.out’ for details.
Check History
ERROR 9 OK · 2 NOTE · 0 WARNING · 3 ERROR · 0 FAILURE Mar 10, 2026
whether package can be installed
Installation failed. See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/blastar.Rcheck/00install.out’ for details.
whether package can be installed
Installation failed. See ‘/data/gannet/ripley/R/packages/tests-clang/blastar.Rcheck/00install.out’ for details.
whether package can be installed
Installation failed. See ‘/data/gannet/ripley/R/packages/tests-devel/blastar.Rcheck/00install.out’ for details.
package dependencies
Package suggested but not available for checking: ‘msa’
package dependencies
Package suggested but not available for checking: ‘pwalign’