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bios2mds

1.2.3

From Biological Sequences to Multidimensional Scaling

0packages depend
5.3Kdownloads / year
–test coverage
0/13checks pass

Overview

About
Maintained by Marie ChabbertFirst published 2011-07-066 releasesCRAN page ↗

Utilities dedicated to the analysis of biological sequences by metric MultiDimensional Scaling with projection of supplementary data. It contains functions for reading multiple sequence alignment files, calculating distance matrices, performing metric multidimensional scaling and visualizing results.

Install

Health

CRAN checks
13NOTE
Failing flavors
  • NOTE r-devel-linux-x86_64-debian-clang
  • NOTE r-devel-linux-x86_64-debian-gcc
  • NOTE r-devel-linux-x86_64-fedora-clang
  • NOTE r-devel-linux-x86_64-fedora-gcc
  • NOTE r-devel-windows-x86_64
  • NOTE r-oldrel-macos-arm64
  • NOTE r-oldrel-macos-x86_64
  • NOTE r-oldrel-windows-x86_64
  • NOTE r-patched-linux-x86_64
  • NOTE r-release-linux-x86_64
  • NOTE r-release-macos-arm64
  • NOTE r-release-macos-x86_64
  • NOTE r-release-windows-x86_64
Code health
None
Tests · ratio 0.00
not tracked
Coverage
100%
Documentation · exports
None
Vignettes
No
README
5
Dependencies · direct
Check history
  • NOTE2026-03-10
    0 OK · 14 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Downloads

5.3K
CRAN downloads in the past year
Rank #10,031 · ~15/day · ~443/mo
bios2mds
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38730 days
1.1K90 days
5.3K1 year
Compare downloads with other packages →
Also on1.5K r2u37 autocran
Source & community

Repository stars, issues, and contributor activity are not tracked yet.

Dependencies

Declared dependencies
4 external dependencies (excludes base and recommended)
Depends (6)
R >= 3.6.0amape1071scalesclusterrgl
Imports (0)
none
LinkingTo (0)
none
Suggests (0)
none
Enhances (0)
none
Reverse dependencies
0direct
–indirect (not tracked)

Nothing depends on this yet.

Code & Tests

Code Composition
Rd 2,005 (58%)R 1,426 (42%)

Test coverage

Line coverage

–

Expression

–

Tests / Examples

–

Functions

22 20 exported

Complexity

11.7 avg / 42 max

Call network

22 nodes / 10 edges

Test coverage has not been measured for this package yet; nodes fall back to a neutral fill.

Call graph

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Lowest coverage

Per-function coverage is not measured for this package yet.

People & History

People (0)

Author records are not tracked yet for this package.

Release timeline

6 releases. Pick two to compare their code metrics. R releases are shown for context.

  • R
    R 4.6.0 released · 2026-04-24
  • R
    R 4.5.0 released · 2025-04-11
  • R
    R 4.4.0 released · 2024-04-24
  • R
    R 4.3.0 released · 2023-04-21
  • R
    R 4.2.0 released · 2022-04-22
  • R
    R 4.1.0 released · 2021-05-18
  • R
    R 4.0.0 released · 2020-04-24
  • 1.2.3Latest
    2020-04-07 · current release · diff ↗
  • R
    R 3.6.0 released · 2019-04-26
  • R
    R 3.5.0 released · 2018-04-23
  • R
    R 3.4.0 released · 2017-04-21
  • R
    R 3.3.0 released · 2016-05-03
  • R
    R 3.2.0 released · 2015-04-16
  • R
    R 3.1.0 released · 2014-04-10
  • R
    R 3.0.0 released · 2013-04-03
  • 1.2.2
    2012-06-05 · diff ↗
Show 7 earlier events
  • R
    R 2.15.0 released · 2012-03-30
  • 1.2.1
    2012-03-27 · diff ↗
  • 1.2
    2011-12-27 · diff ↗
  • R
    R 2.14.0 released · 2011-10-31
  • 1.1
    2011-07-23 · diff ↗
  • 1.0
    2011-07-06
  • R
    R 2.13.0 released · 2011-04-13

Package metadata

First published
2011-07-06
Total releases
6 / 15 yrs
License
GPL
Download size
not tracked yet
Installed size
not tracked yet
With dependencies
not tracked yet