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bioLeak

Leakage-Safe Modeling and Auditing for Genomic and Clinical Data

v0.3.5 · Mar 26, 2026 · MIT + file LICENSE

Description

Prevents and detects information leakage in biomedical machine learning. Provides leakage-resistant split policies (subject-grouped, batch-blocked, study leave-out, time-ordered), guarded preprocessing (train-only imputation, normalization, filtering, feature selection), cross-validated fitting with common learners, permutation-gap auditing, batch and fold association tests, and duplicate detection.

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CRAN Check Status

14 OK
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r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Dependency Network

Dependencies Reverse dependencies digest generics SummarizedExperiment hardhat parsnip bioLeak

Version History

updated 0.3.5 ← 0.3.0 diff Mar 26, 2026
new 0.3.0 Mar 10, 2026
updated 0.3.0 ← 0.2.0 diff Mar 4, 2026
updated 0.2.0 ← 0.1.0 diff Feb 10, 2026
new 0.1.0 Feb 5, 2026