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Taxonomic Uncertainty on Multivariate Analyses of Ecological Data

v1.1-3 · Jun 17, 2025 · GPL (>= 2)

Description

Permutational method to incorporate taxonomic uncertainty and some functions to assess its effects on parameters of some widely used multivariate methods in ecology, as explained in Cayuela et al. (2011) <doi:10.1111/j.1600-0587.2009.05899.x>.

Downloads

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1

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29

Last 90 days

184

Last year

Trend: -91.7% (30d vs prior 30d)

autoCRAN

8

Last 7 days

20

Last 30 days

2

All-time

autoCRAN-only: this name is served only by autoCRAN, so the count is exact.

CRAN Check Status

13 OK
Show all 13 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Code

Structure

Lines of code

1,129

Files

30

Compiled share

0%

Has compiled src

No

Language breakdown

R 595 (52.7%)Docs 534 (47.3%)

API

Exported functions

6

Internal functions

0

Recent export changes

v1.1-1+6 pertables, pertables.p2, adonis_pertables +3 more  −1 pattern:.
v1.1-0+1 pattern:.  −1 pattern:^[[:alpha:]]+

Testing & CI

Has tests

No

Test-to-code ratio

0.00

testthat edition

CI present

No

CI type

[]

PR gated

No

Docs

Return-value doc rate

100%

\dontrun example ratio

0%

Roxygen coverage

100%

Has pkgdown

No

NEWS present

No

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

0%

Unsafe pattern score

24

Dep constraint coverage

0%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

System requirements

C++ standard

License

GPL (>= 2)

License flags

SPDX valid, OSI approved

History

Versions

5

First release

2008-06-08

Latest release

2025-06-17

Avg cadence

1037 days

Cold removal rate

100%

Dep drift

3

LOC over versions

v1.0-0: 387 LOCv1.1-0: 907 LOCv1.1-1: 1,133 LOCv1.1-2: 1,132 LOCv1.1-3: 1,129 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/cran-code-metrics.

Dependency Network

Dependencies Reverse dependencies vegan betaper

Version History

6 tracked
new 1.1-3 Mar 10, 2026
updated 1.1-3 ← 1.1-2 diff Jun 17, 2025
updated 1.1-2 ← 1.1-1 diff Nov 23, 2020
updated 1.1-1 ← 1.1-0 diff Mar 1, 2020
updated 1.1-0 ← 1.0-0 diff Oct 28, 2012
new 1.0-0 Jun 8, 2008