bedrockbio
Open-Access Computational Biology Datasets
Description
Efficiently access the 'Bedrock Bio' library of open-access computational biology datasets. Lazily query datasets backed by 'DuckDB' and 'Apache Iceberg', with support for predicate pushdown and column projection to the cloud storage backend. This enables quick, iterative access to otherwise massive, unwieldy datasets without downloading them in full. See <https://bedrock.bio> for available datasets and documentation.
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CRAN Check Status
Show all 10 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | OK |
| r-devel-linux-x86_64-debian-gcc | OK |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-oldrel-macos-arm64 | OK |
| r-oldrel-macos-x86_64 | OK |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
Check History
OK 10 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Jun 9, 2026
ERROR 9 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Jun 8, 2026
package dependencies
Package required but not available: ‘dbplyr’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual.
OK 10 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE May 24, 2026
ERROR 9 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE May 17, 2026
package dependencies
Package required but not available: ‘duckdb’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual.
OK 10 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE May 15, 2026
ERROR 9 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE May 13, 2026
package dependencies
Package required but not available: ‘duckdb’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual.