Skip to content

babelwhale

Talking to 'Docker' and 'Singularity' Containers

v1.2.0 · Jul 14, 2023 · MIT + file LICENSE

Description

Provides a unified interface to interact with 'docker' and 'singularity' containers. You can execute a command inside a container, mount a volume or copy a file.

Downloads

CRAN

567

Last 30 days

6508th

1.6K

Last 90 days

11.1K

Last year

Trend: +11.8% (30d vs prior 30d)

r2u CRAN

0

Last 30 days

26

Last 90 days

125

Last year

Trend: -100% (30d vs prior 30d)

autoCRAN

8

Last 7 days

54

Last 30 days

2

All-time

autoCRAN-only: this name is served only by autoCRAN, so the count is exact.

CRAN Check Status

2 NOTE
11 OK
Show all 13 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang NOTE
r-devel-linux-x86_64-debian-gcc NOTE
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK
Check details (2 non-OK)
NOTE r-devel-linux-x86_64-debian-clang

DESCRIPTION meta-information

Author field differs from that derived from Authors@R
  Author:    ‘Robrecht Cannoodt [aut, cre] (<https://orcid.org/0000-0003-3641-729X>, rcannood), Wouter Saelens [aut] (<https://orcid.org/0000-0002-7114-6248>, zouter), Joel Nitta [aut] (<https://orcid.org/0000-0003-4719-7472>, joelnitta)’
  Authors@R: ‘Robrecht Cannoodt [aut, cre] (ORCID: <https://orcid.org/0000-0003-3641-729X>, github: rcannood), Wouter Saelens [aut] (ORCID: <https://orcid.org/0000-0002-7114-6248>, github: zouter), Joel Nitta [aut] (ORCID: <https://orcid.org/0000-0003-4719-7472>, github: joelnitta)’
NOTE r-devel-linux-x86_64-debian-gcc

DESCRIPTION meta-information

Author field differs from that derived from Authors@R
  Author:    ‘Robrecht Cannoodt [aut, cre] (<https://orcid.org/0000-0003-3641-729X>, rcannood), Wouter Saelens [aut] (<https://orcid.org/0000-0002-7114-6248>, zouter), Joel Nitta [aut] (<https://orcid.org/0000-0003-4719-7472>, joelnitta)’
  Authors@R: ‘Robrecht Cannoodt [aut, cre] (ORCID: <https://orcid.org/0000-0003-3641-729X>, github: rcannood), Wouter Saelens [aut] (ORCID: <https://orcid.org/0000-0002-7114-6248>, github: zouter), Joel Nitta [aut] (ORCID: <https://orcid.org/0000-0003-4719-7472>, github: joelnitta)’

Check History

NOTE 11 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Jun 9, 2026
NOTE r-devel-linux-x86_64-debian-clang

DESCRIPTION meta-information

Author field differs from that derived from Authors@R
  Author:    ‘Robrecht Cannoodt [aut, cre] (<https://orcid.org/0000-0003-3641-729X>, rcannood), Wouter Saelens [aut] (<https://orcid.org/0000-0002-7114-6248>, zouter), Joel Nitta [aut] (<https://o
...[truncated]...
aut, cre] (ORCID: <https://orcid.org/0000-0003-3641-729X>, github: rcannood), Wouter Saelens [aut] (ORCID: <https://orcid.org/0000-0002-7114-6248>, github: zouter), Joel Nitta [aut] (ORCID: <https://orcid.org/0000-0003-4719-7472>, github: joelnitta)’
NOTE r-devel-linux-x86_64-debian-gcc

DESCRIPTION meta-information

Author field differs from that derived from Authors@R
  Author:    ‘Robrecht Cannoodt [aut, cre] (<https://orcid.org/0000-0003-3641-729X>, rcannood), Wouter Saelens [aut] (<https://orcid.org/0000-0002-7114-6248>, zouter), Joel Nitta [aut] (<https://o
...[truncated]...
aut, cre] (ORCID: <https://orcid.org/0000-0003-3641-729X>, github: rcannood), Wouter Saelens [aut] (ORCID: <https://orcid.org/0000-0002-7114-6248>, github: zouter), Joel Nitta [aut] (ORCID: <https://orcid.org/0000-0003-4719-7472>, github: joelnitta)’
ERROR 11 OK · 1 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Jun 8, 2026
NOTE r-devel-linux-x86_64-debian-clang

DESCRIPTION meta-information

Author field differs from that derived from Authors@R
  Author:    ‘Robrecht Cannoodt [aut, cre] (<https://orcid.org/0000-0003-3641-729X>, rcannood), Wouter Saelens [aut] (<https://orcid.org/0000-0002-7114-6248>, zouter), Joel Nitta [aut] (<https://o
...[truncated]...
aut, cre] (ORCID: <https://orcid.org/0000-0003-3641-729X>, github: rcannood), Wouter Saelens [aut] (ORCID: <https://orcid.org/0000-0002-7114-6248>, github: zouter), Joel Nitta [aut] (ORCID: <https://orcid.org/0000-0003-4719-7472>, github: joelnitta)’
ERROR r-devel-linux-x86_64-debian-gcc

package dependencies

Package required but not available: ‘dynutils’

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
NOTE r-devel-linux-x86_64-debian-clang

DESCRIPTION meta-information

Author field differs from that derived from Authors@R
  Author:    ‘Robrecht Cannoodt [aut, cre] (<https://orcid.org/0000-0003-3641-729X>, rcannood), Wouter Saelens [aut] (<https://orcid.org/0000-0002-7114-6248>, zouter), Joel Nitta [aut] (<https://o
...[truncated]...
aut, cre] (ORCID: <https://orcid.org/0000-0003-3641-729X>, github: rcannood), Wouter Saelens [aut] (ORCID: <https://orcid.org/0000-0002-7114-6248>, github: zouter), Joel Nitta [aut] (ORCID: <https://orcid.org/0000-0003-4719-7472>, github: joelnitta)’
NOTE r-devel-linux-x86_64-debian-gcc

DESCRIPTION meta-information

Author field differs from that derived from Authors@R
  Author:    ‘Robrecht Cannoodt [aut, cre] (<https://orcid.org/0000-0003-3641-729X>, rcannood), Wouter Saelens [aut] (<https://orcid.org/0000-0002-7114-6248>, zouter), Joel Nitta [aut] (<https://o
...[truncated]...
aut, cre] (ORCID: <https://orcid.org/0000-0003-3641-729X>, github: rcannood), Wouter Saelens [aut] (ORCID: <https://orcid.org/0000-0002-7114-6248>, github: zouter), Joel Nitta [aut] (ORCID: <https://orcid.org/0000-0003-4719-7472>, github: joelnitta)’

Code

Structure

Lines of code

1,364

Files

43

Compiled share

0%

Has compiled src

No

Language breakdown

R 828 (60.7%)Tests 174 (12.8%)Docs 362 (26.5%)

API

Exported functions

13

Internal functions

11

Recent export changes

v1.1.0+1 run_auto_mount

Testing & CI

Has tests

Yes

Test-to-code ratio

0.21

testthat edition

CI present

No

CI type

[]

PR gated

No

Docs

Return-value doc rate

11.1%

\dontrun example ratio

0%

Roxygen coverage

100%

Has pkgdown

No

NEWS present

Yes

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

0%

Unsafe pattern score

0

Dep constraint coverage

11.1%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

3.0.0

System requirements

2

C++ standard

License

MIT + file LICENSE

License flags

SPDX valid, OSI approved

History

Versions

6

First release

2019-07-09

Latest release

2023-07-14

Avg cadence

330 days

Cold removal rate

Dep drift

3

LOC over versions

v1.0.0: 1,020 LOCv1.0.1: 1,053 LOCv1.0.2: 1,077 LOCv1.0.3: 1,083 LOCv1.1.0: 1,327 LOCv1.2.0: 1,364 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/cran-code-metrics.

Reverse Dependencies (1)

imports

Dependency Network

Dependencies Reverse dependencies crayon dplyr fs dynutils processx purrr digest glue dynwrap babelwhale

Version History

7 tracked
new 1.2.0 Mar 10, 2026
updated 1.2.0 ← 1.1.0 diff Jul 14, 2023
updated 1.1.0 ← 1.0.3 diff Aug 17, 2022
updated 1.0.3 ← 1.0.2 diff Jun 24, 2021
updated 1.0.2 ← 1.0.1 diff Jun 1, 2021
updated 1.0.1 ← 1.0.0 diff Oct 2, 2019
new 1.0.0 Jul 8, 2019