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assignPOP

Population Assignment using Genetic, Non-Genetic or Integrated Data in a Machine Learning Framework

v1.3.1 · Sep 12, 2025 · GPL (>= 2)
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Description

Use Monte-Carlo and K-fold cross-validation coupled with machine- learning classification algorithms to perform population assignment, with functionalities of evaluating discriminatory power of independent training samples, identifying informative loci, reducing data dimensionality for genomic data, integrating genetic and non-genetic data, and visualizing results.

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14 OK
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r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Dependency Network

Dependencies Reverse dependencies caret doParallel e1071 foreach ggplot2 MASS randomForest reshape2 stringr tree rlang assignPOP

Version History

new 1.3.1 Mar 10, 2026
updated 1.3.1 ← 1.3.0 diff Sep 11, 2025
updated 1.3.0 ← 1.2.4 diff Mar 12, 2024
updated 1.2.4 ← 1.2.2 diff Oct 26, 2021
updated 1.2.2 ← 1.2.1 diff Nov 16, 2020
updated 1.2.1 ← 1.2.0 diff Nov 2, 2020
updated 1.2.0 ← 1.1.9 diff Jul 24, 2020
updated 1.1.9 ← 1.1.8 diff Mar 15, 2020
updated 1.1.8 ← 1.1.7 diff Mar 1, 2020
updated 1.1.7 ← 1.1.6 diff Aug 27, 2019
updated 1.1.6 ← 1.1.4 diff Jun 8, 2019
updated 1.1.4 ← 1.1.3 diff Mar 12, 2018
updated 1.1.3 ← 1.1.2 diff Jun 14, 2017
updated 1.1.2 ← 1.1.1 diff May 15, 2017
new 1.1.1 Dec 28, 2016