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aedseo

Automated and Early Detection of Seasonal Epidemic Onset and Burden Levels

v1.1.0 · Jan 23, 2026 · MIT + file LICENSE

Description

A powerful tool for automating the early detection of seasonal epidemic onsets in time series data. It offers the ability to estimate growth rates across consecutive time intervals, calculate the sum of cases (SoC) within those intervals, and estimate seasonal onsets within user defined seasons. With use of a disease-specific threshold it also offers the possibility to estimate seasonal onset of epidemics. Additionally it offers the ability to estimate burden levels for seasons based on historical data. It is aimed towards epidemiologists, public health professionals, and researchers seeking to identify and respond to seasonal epidemics in a timely fashion.

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CRAN Check Status

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Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Jun 9, 2026
ERROR 12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Jun 8, 2026
ERROR r-devel-linux-x86_64-debian-gcc

whether package can be installed

Installation failed.
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/aedseo.Rcheck/00install.out’ for details.
OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Dependency Network

Dependencies Reverse dependencies checkmate dplyr ggplot2 lifecycle lubridate plyr purrr pracma rlang scales stringr tibble tidyr aedseo

Version History

8 tracked
new 1.1.0 Mar 10, 2026
updated 1.1.0 ← 1.0.1 diff Jan 22, 2026
updated 1.0.1 ← 1.0.0 diff Nov 19, 2025
updated 1.0.0 ← 0.3.0 diff Nov 16, 2025
updated 0.3.0 ← 0.1.2 diff Apr 8, 2025
updated 0.1.2 ← 0.1.1 diff Nov 26, 2023
updated 0.1.1 ← 0.1.0 diff Nov 15, 2023
new 0.1.0 Nov 6, 2023