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Upsilon

Another Test of Association for Count Data

v0.1.1 · Mar 7, 2026 · LGPL (>= 3)

Description

The Upsilon test assesses association among categorical variables against the null hypothesis of independence (Luo 2021 MS thesis; ProQuest Publication No. 28649813). While promoting dominant function patterns, it demotes non-dominant function patterns. It is robust to low expected count---continuity correction like Yates's seems unnecessary. Using a common null population following a uniform distribution, contingency tables are comparable by statistical significance---not the case for most association tests defining a varying null population by tensor product of observed marginals. Although Pearson's chi-squared test, Fisher's exact test, and Woolf's G-test (related to mutual information) are useful in some contexts, the Upsilon test appeals to ranking association patterns not necessarily following same marginal distributions, such as in count data from DNA and RNA sequencing---a rapidly expanding frontier in modern science.

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CRAN Check Status

14 OK
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r-devel-linux-x86_64-debian-gcc OK
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r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
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r-patched-linux-x86_64 OK
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r-release-macos-arm64 OK
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r-release-windows-x86_64 OK

Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Dependency Network

Dependencies Reverse dependencies Rcpp Rdpack ggplot2 Upsilon

Version History

new 0.1.1 Mar 10, 2026
updated 0.1.1 ← 0.1.0 diff Mar 6, 2026
new 0.1.0 Jan 5, 2026