StratifiedMedicine

1.0.7

Stratified Medicine

0packages depend

3.1Kdownloads / year

–test coverage

13/13checks pass

Overview

About

Maintained by Thomas JemielitaFirst published 2019-06-1915 releasesCRAN page ↗GitHub ↗

A toolkit for stratified medicine, subgroup identification, and precision medicine. Current tools include (1) filtering models (reduce covariate space), (2) patient-level estimate models (counterfactual patient-level quantities, such as the conditional average treatment effect), (3) subgroup identification models (find subsets of patients with similar treatment effects), and (4) treatment effect estimation and inference (for the overall population and discovered subgroups). These tools can be customized and are directly used in PRISM (patient response identifiers for stratified medicine; Jemielita and Mehrotra 2019 <doi:10.48550/arXiv.1912.03337>).

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("StratifiedMedicine")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

pak::pak("thomasjemielita/StratifiedMedicine")

Development version from thomasjemielita/StratifiedMedicine. Requires the pak package.

Release

# one-time r2u setup for Ubuntu (noble)

curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash

# then install

sudo apt install r-cran-stratifiedmedicine

Fast Ubuntu binaries via r2u (no compilation). Run the setup once per machine.

bspm (used by r2u) also needs make: sudo apt install make

sudo dnf copr enable iucar/cran

sudo dnf install R-CRAN-StratifiedMedicine

RPMs from the iucar/cran COPR, rebuilt from CRAN.

sudo zypper install R-StratifiedMedicine

RPMs auto-built from CRAN on openSUSE OBS.

Health

CRAN checks

13OK

Code health

Yes

Tests · ratio 0.36

not tracked

Coverage

100%

Documentation · exports

Yes

Vignettes

Yes

README

Dependencies · direct

Check history

OK2026-04-25
12 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-03-10
3 OK · 11 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Downloads

3.1K

CRAN downloads in the past year

Rank #12,320 · ~9/day · ~262/mo

37330 days

86290 days

3.1K1 year

Also on108 r2u18 autocran

Source & community

GitHub ↗

Repository stars, issues, and contributor activity are not tracked yet.

Dependencies

Declared dependencies

17 external dependencies (excludes base and recommended)

Depends (1)

R >= 3.6

Imports (10)

dplyr partykit ranger survival baseglmnet ggplot2 ggparty mvtnorm coin rlang

LinkingTo (0)

none

Suggests (10)

knitr rmarkdown MASS baseBART pROC survRM2 TH.data sandwich rpart basetestthat

Enhances (0)

none

Reverse dependencies

0direct

–indirect (not tracked)

Nothing depends on this yet.

Code

9,608Lines of code

11Exported functions

Code & tests

Open call graph →

Code intelligence has not been computed for this package yet.

People & History

People (1)

Maintainer (1)

Thomas Jemielita

Author, Maintainer

Release timeline

15 releases. Pick two to compare their code metrics; R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
1.0.7Latest
2026-03-25 · current release
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
R
R 4.2.0 released · 2022-04-22
1.0.5
2022-03-30 · diff ↗
1.0.4
2021-09-02 · diff ↗
R
R 4.1.0 released · 2021-05-18
1.0.3
2021-01-07 · diff ↗
1.0.2
2020-08-03 · diff ↗
1.0.1
2020-06-17 · diff ↗
1.0.0
2020-06-10 · diff ↗
R
R 4.0.0 released · 2020-04-24
0.2.3
2020-04-22 · diff ↗
0.2.2
2020-03-01 · diff ↗

Show 6 earlier events

0.2.1
2019-12-12 · diff ↗
0.2.0
2019-10-13 · diff ↗
0.1.3
2019-09-04 · diff ↗
0.1.2
2019-08-19 · diff ↗
0.1.1
2019-07-22 · diff ↗
0.1.0
2019-06-19

Package metadata

First published: 2019-06-19
Total releases: 15 / 7 yrs
License: GPL-3 OSI
Download size: not tracked yet
Installed size: not tracked yet
With dependencies: not tracked yet