SongEvo

An Individual-Based Model of Bird Song Evolution

v1.0.0 · Mar 5, 2019 · GPL-3

Description

Simulates the cultural evolution of quantitative traits of bird song. 'SongEvo' is an individual- (agent-) based model. 'SongEvo' is spatially-explicit and can be parameterized with, and tested against, measured song data. Functions are available for model implementation, sensitivity analyses, parameter optimization, model validation, and hypothesis testing.

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CRAN Check Status

13 OK

Show all 13 flavors

Flavor	Status	Time
r-devel-linux-x86_64-debian-clang	OK	132.7s
r-devel-linux-x86_64-debian-gcc	OK	95.5s
r-devel-linux-x86_64-fedora-clang	OK	218.3s
r-devel-linux-x86_64-fedora-gcc	OK	255.3s
r-devel-windows-x86_64	OK	192s
r-oldrel-macos-arm64	OK
r-oldrel-macos-x86_64	OK	128s
r-oldrel-windows-x86_64	OK	225s
r-patched-linux-x86_64	OK	127.3s
r-release-linux-x86_64	OK
r-release-macos-arm64	OK	35s
r-release-macos-x86_64	OK	140s
r-release-windows-x86_64	OK	188s

Check History

OK 13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Jun 9, 2026

ERROR 12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Jun 8, 2026

ERROR r-devel-linux-x86_64-debian-gcc

re-building of vignette outputs

Error(s) in re-building vignettes:
  ...
--- re-building ‘SongEvo.Rmd’ using rmarkdown

Quitting from SongEvo.Rmd:157-159 [Load Hmisc package for plotting functions]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<er
...[truncated]...
: processing vignette 'SongEvo.Rmd' failed with diagnostics:
there is no package called 'Hmisc'
--- failed re-building ‘SongEvo.Rmd’

SUMMARY: processing the following file failed:
  ‘SongEvo.Rmd’

Error: Vignette re-building failed.
Execution halted

OK 12 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Apr 25, 2026

ERROR 13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Mar 30, 2026

ERROR r-oldrel-windows-x86_64

re-building of vignette outputs

Error(s) in re-building vignettes:
--- re-building 'SongEvo.Rmd' using rmarkdown
! Package pdftex.def Error: File `1887b37bb7a72ff586790260cf53cbf20bfea159.pdf'
 not found: using draft setting.

Error: processing vignette 'SongEvo.Rmd' failed with di
...[truncated]...
. See https://yihui.org/tinytex/r/#debugging for debugging tips. See SongEvo.log for more info.
--- failed re-building 'SongEvo.Rmd'

SUMMARY: processing the following file failed:
  'SongEvo.Rmd'

Error: Vignette re-building failed.
Execution halted

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026