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SVAlignR

Recovering Structure of Long Molecules from Structural Variation Data

v0.9.2 · Sep 24, 2025 · Apache License (== 2.0)

Description

Implements a method to combine multiple levels of multiple sequence alignment to uncover the structure of complex DNA rearrangements.

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CRAN Check Status

14 OK
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r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Dependency Network

Dependencies Reverse dependencies oompaBase Biostrings NameNeedle dendextend ape stringr igraph Polychrome colorspace SVAlignR

Version History

new 0.9.2 Mar 10, 2026