SOHPIE
Statistical Approach via Pseudo-Value Information and Estimation
v1.0.6
·
Oct 23, 2023
·
GPL-3
Description
'SOHPIE' (pronounced as SOFIE) is a novel pseudo-value regression approach for differential co-abundance network analysis of microbiome data, which can include additional clinical covariate in the model. The full methodological details can be found in Ahn S and Datta S (2023) <arXiv:2303.13702v1>.
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CRAN Check Status
2
NOTE
12
OK
Show all 14 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | NOTE |
| r-devel-linux-x86_64-debian-gcc | NOTE |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-macos-arm64 | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | OK |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (2 non-OK)
NOTE
r-devel-linux-x86_64-debian-clang
CRAN incoming feasibility
Maintainer: ‘Seungjun Ahn <seungjun.ahn@mountsinai.org>’ The Description field contains <arXiv:2303.13702v1>. Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
NOTE
r-devel-linux-x86_64-debian-gcc
CRAN incoming feasibility
Maintainer: ‘Seungjun Ahn <seungjun.ahn@mountsinai.org>’ The Description field contains <arXiv:2303.13702v1>. Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Check History
NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 30, 2026
NOTE
r-devel-linux-x86_64-debian-clang
CRAN incoming feasibility
Maintainer: ‘Seungjun Ahn <seungjun.ahn@mountsinai.org>’ The Description field contains <arXiv:2303.13702v1>. Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
NOTE
r-devel-linux-x86_64-debian-gcc
CRAN incoming feasibility
Maintainer: ‘Seungjun Ahn <seungjun.ahn@mountsinai.org>’ The Description field contains <arXiv:2303.13702v1>. Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
ERROR 11 OK · 2 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Mar 10, 2026
NOTE
r-devel-linux-x86_64-debian-clang
CRAN incoming feasibility
Maintainer: ‘Seungjun Ahn <seungjun.ahn@mountsinai.org>’ The Description field contains <arXiv:2303.13702v1>. Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
NOTE
r-devel-linux-x86_64-debian-gcc
CRAN incoming feasibility
Maintainer: ‘Seungjun Ahn <seungjun.ahn@mountsinai.org>’ The Description field contains <arXiv:2303.13702v1>. Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
ERROR
r-devel-macos-arm64
re-building of vignette outputs
Error(s) in re-building vignettes: --- re-building ‘UserManualSOHPIE.Rmd’ using rmarkdown *** caught segfault *** address 0x110, cause 'invalid permissions' *** caught segfault *** address 0x110, cause 'invalid permissions' Traceback: 1: solve. ...[truncated]... te 'UserManualSOHPIE.Rmd' failed with diagnostics: cannot open the connection --- failed re-building ‘UserManualSOHPIE.Rmd’ SUMMARY: processing the following file failed: ‘UserManualSOHPIE.Rmd’ Error: Vignette re-building failed. Execution halted