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SIMICO

Set-Based Inference for Multiple Interval-Censored Outcomes

v0.2.0 · Nov 25, 2022 · GPL-3

Description

Contains tests for association between a set of genetic variants and multiple correlated outcomes that are interval censored. Interval-censored data arises when the exact time of the onset of an outcome of interest is unknown but known to fall between two time points.

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r-devel-linux-x86_64-debian-clang NOTE
r-devel-linux-x86_64-debian-gcc NOTE
r-devel-linux-x86_64-fedora-clang NOTE
r-devel-linux-x86_64-fedora-gcc NOTE
r-devel-macos-arm64 NOTE
r-devel-windows-x86_64 NOTE
r-oldrel-macos-arm64 NOTE
r-oldrel-macos-x86_64 NOTE
r-oldrel-windows-x86_64 NOTE
r-patched-linux-x86_64 NOTE
r-release-linux-x86_64 NOTE
r-release-macos-arm64 NOTE
r-release-macos-x86_64 NOTE
r-release-windows-x86_64 NOTE
Check details (14 non-OK)
NOTE r-devel-linux-x86_64-debian-clang

Rd files

checkRd: (-1) fd_term.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{theta_l}
       |     ^
checkRd: (-1) gamma_fd.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{gamma_l}
       |     ^
checkRd: (-1) gamma_off.Rd:4: Lost braces; missing escapes or markup?
     4 | d^2/d_{gamma_l}d{gamma_m}
       |       ^
checkRd: (-1) gamma_off.Rd:4: Lost braces
     4 | d^2/d_{gamma_l}d{gamma_m}
       |                 ^
checkRd: (-1) gamma_off.Rd:7: Lost braces; missing escapes or markup?
     7 | Calculates the [off-diagonal] Information matrix term for I_{gamma gamma} with respect to outcome l and outcome m.
       |                                                             ^
checkRd: (-1) gamma_on.Rd:4: Lost braces; missing escapes or markup?
     4 | d^2/d_{gamma_l}d{gamma_l}
       |       ^
checkRd: (-1) gamma_on.Rd:4: Lost braces
     4 | d^2/d_{gamma_l}d{gamma_l}
       |                 ^
checkRd: (-1) gamma_on.Rd:7: Lost braces; missing escapes or markup?
   
...[truncated]...
           ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |   ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |          ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |                    ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |                           ^
checkRd: (-1) surv_left.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik})
       |   ^
checkRd: (-1) surv_left.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik})
       |          ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |   ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |          ^
NOTE r-devel-linux-x86_64-debian-gcc

Rd files

checkRd: (-1) fd_term.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{theta_l}
       |     ^
checkRd: (-1) gamma_fd.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{gamma_l}
       |     ^
checkRd: (-1) gamma_off.Rd:4: Lost braces; missing escapes or markup?
     4 | d^2/d_{gamma_l}d{gamma_m}
       |       ^
checkRd: (-1) gamma_off.Rd:4: Lost braces
     4 | d^2/d_{gamma_l}d{gamma_m}
       |                 ^
checkRd: (-1) gamma_off.Rd:7: Lost braces; missing escapes or markup?
     7 | Calculates the [off-diagonal] Information matrix term for I_{gamma gamma} with respect to outcome l and outcome m.
       |                                                             ^
checkRd: (-1) gamma_on.Rd:4: Lost braces; missing escapes or markup?
     4 | d^2/d_{gamma_l}d{gamma_l}
       |       ^
checkRd: (-1) gamma_on.Rd:4: Lost braces
     4 | d^2/d_{gamma_l}d{gamma_l}
       |                 ^
checkRd: (-1) gamma_on.Rd:7: Lost braces; missing escapes or markup?
   
...[truncated]...
           ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |   ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |          ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |                    ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |                           ^
checkRd: (-1) surv_left.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik})
       |   ^
checkRd: (-1) surv_left.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik})
       |          ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |   ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |          ^
NOTE r-devel-linux-x86_64-fedora-clang

Rd files

checkRd: (-1) fd_term.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{theta_l}
       |     ^
checkRd: (-1) gamma_fd.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{gamma_l}
       |     ^
checkRd: (-1) gamma_off.Rd:4: Lost braces; missing escapes or markup?
     4 | d^2/d_{gamma_l}d{gamma_m}
       |       ^
checkRd: (-1) gamma_off.Rd:4: Lost braces
     4 | d^2/d_{gamma_l}d{gamma_m}
       |                 ^
checkRd: (-1) gamma_off.Rd:7: Lost braces; missing escapes or markup?
     7 | Calculates the [off-diagonal] Information matrix term for I_{gamma gamma} with respect to outcome l and outcome m.
       |                                                             ^
checkRd: (-1) gamma_on.Rd:4: Lost braces; missing escapes or markup?
     4 | d^2/d_{gamma_l}d{gamma_l}
       |       ^
checkRd: (-1) gamma_on.Rd:4: Lost braces
     4 | d^2/d_{gamma_l}d{gamma_l}
       |                 ^
checkRd: (-1) gamma_on.Rd:7: Lost braces; missing escapes or markup?
   
...[truncated]...
           ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |   ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |          ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |                    ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |                           ^
checkRd: (-1) surv_left.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik})
       |   ^
checkRd: (-1) surv_left.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik})
       |          ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |   ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |          ^
NOTE r-devel-linux-x86_64-fedora-gcc

Rd files

checkRd: (-1) fd_term.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{theta_l}
       |     ^
checkRd: (-1) gamma_fd.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{gamma_l}
       |     ^
checkRd: (-1) gamma_off.Rd:4: Lost braces; missing escapes or markup?
     4 | d^2/d_{gamma_l}d{gamma_m}
       |       ^
checkRd: (-1) gamma_off.Rd:4: Lost braces
     4 | d^2/d_{gamma_l}d{gamma_m}
       |                 ^
checkRd: (-1) gamma_off.Rd:7: Lost braces; missing escapes or markup?
     7 | Calculates the [off-diagonal] Information matrix term for I_{gamma gamma} with respect to outcome l and outcome m.
       |                                                             ^
checkRd: (-1) gamma_on.Rd:4: Lost braces; missing escapes or markup?
     4 | d^2/d_{gamma_l}d{gamma_l}
       |       ^
checkRd: (-1) gamma_on.Rd:4: Lost braces
     4 | d^2/d_{gamma_l}d{gamma_l}
       |                 ^
checkRd: (-1) gamma_on.Rd:7: Lost braces; missing escapes or markup?
   
...[truncated]...
           ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |   ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |          ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |                    ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |                           ^
checkRd: (-1) surv_left.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik})
       |   ^
checkRd: (-1) surv_left.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik})
       |          ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |   ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |          ^
NOTE r-devel-macos-arm64

Rd files

checkRd: (-1) fd_term.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{theta_l}
       |     ^
checkRd: (-1) gamma_fd.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{gamma_l}
       |     ^
checkRd: (-1) gamma_off.Rd:4: Lost braces; missing escapes or markup?
     4 | d^2/d_{gamma_l}d{gamma_m}
       |       ^
checkRd: (-1) gamma_off.Rd:4: Lost braces
     4 | d^2/d_{gamma_l}d{gamma_m}
       |                 ^
checkRd: (-1) gamma_off.Rd:7: Lost braces; missing escapes or markup?
     7 | Calculates the [off-diagonal] Information matrix term for I_{gamma gamma} with respect to outcome l and outcome m.
       |                                                             ^
checkRd: (-1) gamma_on.Rd:4: Lost braces; missing escapes or markup?
     4 | d^2/d_{gamma_l}d{gamma_l}
       |       ^
checkRd: (-1) gamma_on.Rd:4: Lost braces
     4 | d^2/d_{gamma_l}d{gamma_l}
       |                 ^
checkRd: (-1) gamma_on.Rd:7: Lost braces; missing escapes or markup?
   
...[truncated]...
           ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |   ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |          ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |                    ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |                           ^
checkRd: (-1) surv_left.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik})
       |   ^
checkRd: (-1) surv_left.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik})
       |          ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |   ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |          ^
NOTE r-devel-windows-x86_64

Rd files

checkRd: (-1) fd_term.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{theta_l}
       |     ^
checkRd: (-1) gamma_fd.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{gamma_l}
       |     ^
checkRd: (-1) gamma_off.Rd:4: Lost braces; missing escapes or markup?
     4 | d^2/d_{gamma_l}d{gamma_m}
       |       ^
checkRd: (-1) gamma_off.Rd:4: Lost braces
     4 | d^2/d_{gamma_l}d{gamma_m}
       |                 ^
checkRd: (-1) gamma_off.Rd:7: Lost braces; missing escapes or markup?
     7 | Calculates the [off-diagonal] Information matrix term for I_{gamma gamma} with respect to outcome l and outcome m.
       |                                                             ^
checkRd: (-1) gamma_on.Rd:4: Lost braces; missing escapes or markup?
     4 | d^2/d_{gamma_l}d{gamma_l}
       |       ^
checkRd: (-1) gamma_on.Rd:4: Lost braces
     4 | d^2/d_{gamma_l}d{gamma_l}
       |                 ^
checkRd: (-1) gamma_on.Rd:7: Lost braces; missing escapes or markup?
   
...[truncated]...
           ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |   ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |          ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |                    ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |                           ^
checkRd: (-1) surv_left.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik})
       |   ^
checkRd: (-1) surv_left.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik})
       |          ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |   ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |          ^
NOTE r-oldrel-macos-arm64

Rd files

checkRd: (-1) fd_term.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{theta_l}
       |     ^
checkRd: (-1) gamma_fd.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{gamma_l}
       |     ^
checkRd: (-1) gamma_off.Rd:4: Lost braces; missing escapes or markup?
     4 | d^2/d_{gamma_l}d{gamma_m}
       |       ^
checkRd: (-1) gamma_off.Rd:4: Lost braces
     4 | d^2/d_{gamma_l}d{gamma_m}
       |                 ^
checkRd: (-1) gamma_off.Rd:7: Lost braces; missing escapes or markup?
     7 | Calculates the [off-diagonal] Information matrix term for I_{gamma gamma} with respect to outcome l and outcome m.
       |                                                             ^
checkRd: (-1) gamma_on.Rd:4: Lost braces; missing escapes or markup?
     4 | d^2/d_{gamma_l}d{gamma_l}
       |       ^
checkRd: (-1) gamma_on.Rd:4: Lost braces
     4 | d^2/d_{gamma_l}d{gamma_l}
       |                 ^
checkRd: (-1) gamma_on.Rd:7: Lost braces; missing escapes or markup?
   
...[truncated]...
           ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |   ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |          ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |                    ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |                           ^
checkRd: (-1) surv_left.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik})
       |   ^
checkRd: (-1) surv_left.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik})
       |          ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |   ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |          ^
NOTE r-oldrel-macos-x86_64

Rd files

checkRd: (-1) fd_term.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{theta_l}
       |     ^
checkRd: (-1) gamma_fd.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{gamma_l}
       |     ^
checkRd: (-1) gamma_off.Rd:4: Lost braces; missing escapes or markup?
     4 | d^2/d_{gamma_l}d{gamma_m}
       |       ^
checkRd: (-1) gamma_off.Rd:4: Lost braces
     4 | d^2/d_{gamma_l}d{gamma_m}
       |                 ^
checkRd: (-1) gamma_off.Rd:7: Lost braces; missing escapes or markup?
     7 | Calculates the [off-diagonal] Information matrix term for I_{gamma gamma} with respect to outcome l and outcome m.
       |                                                             ^
checkRd: (-1) gamma_on.Rd:4: Lost braces; missing escapes or markup?
     4 | d^2/d_{gamma_l}d{gamma_l}
       |       ^
checkRd: (-1) gamma_on.Rd:4: Lost braces
     4 | d^2/d_{gamma_l}d{gamma_l}
       |                 ^
checkRd: (-1) gamma_on.Rd:7: Lost braces; missing escapes or markup?
   
...[truncated]...
           ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |   ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |          ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |                    ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |                           ^
checkRd: (-1) surv_left.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik})
       |   ^
checkRd: (-1) surv_left.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik})
       |          ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |   ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |          ^
NOTE r-oldrel-windows-x86_64

Rd files

checkRd: (-1) fd_term.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{theta_l}
       |     ^
checkRd: (-1) gamma_fd.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{gamma_l}
       |     ^
checkRd: (-1) gamma_off.Rd:4: Lost braces; missing escapes or markup?
     4 | d^2/d_{gamma_l}d{gamma_m}
       |       ^
checkRd: (-1) gamma_off.Rd:4: Lost braces
     4 | d^2/d_{gamma_l}d{gamma_m}
       |                 ^
checkRd: (-1) gamma_off.Rd:7: Lost braces; missing escapes or markup?
     7 | Calculates the [off-diagonal] Information matrix term for I_{gamma gamma} with respect to outcome l and outcome m.
       |                                                             ^
checkRd: (-1) gamma_on.Rd:4: Lost braces; missing escapes or markup?
     4 | d^2/d_{gamma_l}d{gamma_l}
       |       ^
checkRd: (-1) gamma_on.Rd:4: Lost braces
     4 | d^2/d_{gamma_l}d{gamma_l}
       |                 ^
checkRd: (-1) gamma_on.Rd:7: Lost braces; missing escapes or markup?
   
...[truncated]...
           ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |   ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |          ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |                    ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |                           ^
checkRd: (-1) surv_left.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik})
       |   ^
checkRd: (-1) surv_left.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik})
       |          ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |   ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |          ^
NOTE r-patched-linux-x86_64

Rd files

checkRd: (-1) fd_term.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{theta_l}
       |     ^
checkRd: (-1) gamma_fd.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{gamma_l}
       |     ^
checkRd: (-1) gamma_off.Rd:4: Lost braces; missing escapes or markup?
     4 | d^2/d_{gamma_l}d{gamma_m}
       |       ^
checkRd: (-1) gamma_off.Rd:4: Lost braces
     4 | d^2/d_{gamma_l}d{gamma_m}
       |                 ^
checkRd: (-1) gamma_off.Rd:7: Lost braces; missing escapes or markup?
     7 | Calculates the [off-diagonal] Information matrix term for I_{gamma gamma} with respect to outcome l and outcome m.
       |                                                             ^
checkRd: (-1) gamma_on.Rd:4: Lost braces; missing escapes or markup?
     4 | d^2/d_{gamma_l}d{gamma_l}
       |       ^
checkRd: (-1) gamma_on.Rd:4: Lost braces
     4 | d^2/d_{gamma_l}d{gamma_l}
       |                 ^
checkRd: (-1) gamma_on.Rd:7: Lost braces; missing escapes or markup?
   
...[truncated]...
           ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |   ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |          ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |                    ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |                           ^
checkRd: (-1) surv_left.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik})
       |   ^
checkRd: (-1) surv_left.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik})
       |          ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |   ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |          ^
NOTE r-release-linux-x86_64

Rd files

checkRd: (-1) fd_term.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{theta_l}
       |     ^
checkRd: (-1) gamma_fd.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{gamma_l}
       |     ^
checkRd: (-1) gamma_off.Rd:4: Lost braces; missing escapes or markup?
     4 | d^2/d_{gamma_l}d{gamma_m}
       |       ^
checkRd: (-1) gamma_off.Rd:4: Lost braces
     4 | d^2/d_{gamma_l}d{gamma_m}
       |                 ^
checkRd: (-1) gamma_off.Rd:7: Lost braces; missing escapes or markup?
     7 | Calculates the [off-diagonal] Information matrix term for I_{gamma gamma} with respect to outcome l and outcome m.
       |                                                             ^
checkRd: (-1) gamma_on.Rd:4: Lost braces; missing escapes or markup?
     4 | d^2/d_{gamma_l}d{gamma_l}
       |       ^
checkRd: (-1) gamma_on.Rd:4: Lost braces
     4 | d^2/d_{gamma_l}d{gamma_l}
       |                 ^
checkRd: (-1) gamma_on.Rd:7: Lost braces; missing escapes or markup?
   
...[truncated]...
           ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |   ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |          ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |                    ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |                           ^
checkRd: (-1) surv_left.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik})
       |   ^
checkRd: (-1) surv_left.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik})
       |          ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |   ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |          ^
NOTE r-release-macos-arm64

Rd files

checkRd: (-1) fd_term.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{theta_l}
       |     ^
checkRd: (-1) gamma_fd.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{gamma_l}
       |     ^
checkRd: (-1) gamma_off.Rd:4: Lost braces; missing escapes or markup?
     4 | d^2/d_{gamma_l}d{gamma_m}
       |       ^
checkRd: (-1) gamma_off.Rd:4: Lost braces
     4 | d^2/d_{gamma_l}d{gamma_m}
       |                 ^
checkRd: (-1) gamma_off.Rd:7: Lost braces; missing escapes or markup?
     7 | Calculates the [off-diagonal] Information matrix term for I_{gamma gamma} with respect to outcome l and outcome m.
       |                                                             ^
checkRd: (-1) gamma_on.Rd:4: Lost braces; missing escapes or markup?
     4 | d^2/d_{gamma_l}d{gamma_l}
       |       ^
checkRd: (-1) gamma_on.Rd:4: Lost braces
     4 | d^2/d_{gamma_l}d{gamma_l}
       |                 ^
checkRd: (-1) gamma_on.Rd:7: Lost braces; missing escapes or markup?
   
...[truncated]...
           ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |   ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |          ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |                    ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |                           ^
checkRd: (-1) surv_left.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik})
       |   ^
checkRd: (-1) surv_left.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik})
       |          ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |   ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |          ^
NOTE r-release-macos-x86_64

Rd files

checkRd: (-1) fd_term.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{theta_l}
       |     ^
checkRd: (-1) gamma_fd.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{gamma_l}
       |     ^
checkRd: (-1) gamma_off.Rd:4: Lost braces; missing escapes or markup?
     4 | d^2/d_{gamma_l}d{gamma_m}
       |       ^
checkRd: (-1) gamma_off.Rd:4: Lost braces
     4 | d^2/d_{gamma_l}d{gamma_m}
       |                 ^
checkRd: (-1) gamma_off.Rd:7: Lost braces; missing escapes or markup?
     7 | Calculates the [off-diagonal] Information matrix term for I_{gamma gamma} with respect to outcome l and outcome m.
       |                                                             ^
checkRd: (-1) gamma_on.Rd:4: Lost braces; missing escapes or markup?
     4 | d^2/d_{gamma_l}d{gamma_l}
       |       ^
checkRd: (-1) gamma_on.Rd:4: Lost braces
     4 | d^2/d_{gamma_l}d{gamma_l}
       |                 ^
checkRd: (-1) gamma_on.Rd:7: Lost braces; missing escapes or markup?
   
...[truncated]...
           ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |   ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |          ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |                    ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |                           ^
checkRd: (-1) surv_left.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik})
       |   ^
checkRd: (-1) surv_left.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik})
       |          ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |   ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |          ^
NOTE r-release-windows-x86_64

Rd files

checkRd: (-1) fd_term.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{theta_l}
       |     ^
checkRd: (-1) gamma_fd.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{gamma_l}
       |     ^
checkRd: (-1) gamma_off.Rd:4: Lost braces; missing escapes or markup?
     4 | d^2/d_{gamma_l}d{gamma_m}
       |       ^
checkRd: (-1) gamma_off.Rd:4: Lost braces
     4 | d^2/d_{gamma_l}d{gamma_m}
       |                 ^
checkRd: (-1) gamma_off.Rd:7: Lost braces; missing escapes or markup?
     7 | Calculates the [off-diagonal] Information matrix term for I_{gamma gamma} with respect to outcome l and outcome m.
       |                                                             ^
checkRd: (-1) gamma_on.Rd:4: Lost braces; missing escapes or markup?
     4 | d^2/d_{gamma_l}d{gamma_l}
       |       ^
checkRd: (-1) gamma_on.Rd:4: Lost braces
     4 | d^2/d_{gamma_l}d{gamma_l}
       |                 ^
checkRd: (-1) gamma_on.Rd:7: Lost braces; missing escapes or markup?
   
...[truncated]...
           ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |   ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |          ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |                    ^
checkRd: (-1) surv_diff.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik}) - S_{ik}(R_{ik})
       |                           ^
checkRd: (-1) surv_left.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik})
       |   ^
checkRd: (-1) surv_left.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(L_{ik})
       |          ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |   ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |          ^

Check History

NOTE 0 OK · 14 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
NOTE r-devel-linux-x86_64-debian-clang

Rd files

checkRd: (-1) fd_term.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{theta_l}
       |     ^
checkRd: (-1) gamma_fd.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{gamma_l}
       |     ^
checkRd: (-1) gamma_off.Rd:4: Lost br
...[truncated]...
L_{ik})
       |          ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |   ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |          ^
NOTE r-devel-linux-x86_64-debian-gcc

Rd files

checkRd: (-1) fd_term.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{theta_l}
       |     ^
checkRd: (-1) gamma_fd.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{gamma_l}
       |     ^
checkRd: (-1) gamma_off.Rd:4: Lost br
...[truncated]...
L_{ik})
       |          ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |   ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |          ^
NOTE r-devel-linux-x86_64-fedora-clang

Rd files

checkRd: (-1) fd_term.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{theta_l}
       |     ^
checkRd: (-1) gamma_fd.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{gamma_l}
       |     ^
checkRd: (-1) gamma_off.Rd:4: Lost br
...[truncated]...
L_{ik})
       |          ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |   ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |          ^
NOTE r-devel-linux-x86_64-fedora-gcc

Rd files

checkRd: (-1) fd_term.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{theta_l}
       |     ^
checkRd: (-1) gamma_fd.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{gamma_l}
       |     ^
checkRd: (-1) gamma_off.Rd:4: Lost br
...[truncated]...
L_{ik})
       |          ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |   ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |          ^
NOTE r-devel-macos-arm64

Rd files

checkRd: (-1) fd_term.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{theta_l}
       |     ^
checkRd: (-1) gamma_fd.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{gamma_l}
       |     ^
checkRd: (-1) gamma_off.Rd:4: Lost br
...[truncated]...
L_{ik})
       |          ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |   ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |          ^
NOTE r-devel-windows-x86_64

Rd files

checkRd: (-1) fd_term.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{theta_l}
       |     ^
checkRd: (-1) gamma_fd.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{gamma_l}
       |     ^
checkRd: (-1) gamma_off.Rd:4: Lost br
...[truncated]...
L_{ik})
       |          ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |   ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |          ^
NOTE r-patched-linux-x86_64

Rd files

checkRd: (-1) fd_term.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{theta_l}
       |     ^
checkRd: (-1) gamma_fd.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{gamma_l}
       |     ^
checkRd: (-1) gamma_off.Rd:4: Lost br
...[truncated]...
L_{ik})
       |          ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |   ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |          ^
NOTE r-release-linux-x86_64

Rd files

checkRd: (-1) fd_term.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{theta_l}
       |     ^
checkRd: (-1) gamma_fd.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{gamma_l}
       |     ^
checkRd: (-1) gamma_off.Rd:4: Lost br
...[truncated]...
L_{ik})
       |          ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |   ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |          ^
NOTE r-release-macos-arm64

Rd files

checkRd: (-1) fd_term.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{theta_l}
       |     ^
checkRd: (-1) gamma_fd.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{gamma_l}
       |     ^
checkRd: (-1) gamma_off.Rd:4: Lost br
...[truncated]...
L_{ik})
       |          ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |   ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |          ^
NOTE r-release-macos-x86_64

Rd files

checkRd: (-1) fd_term.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{theta_l}
       |     ^
checkRd: (-1) gamma_fd.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{gamma_l}
       |     ^
checkRd: (-1) gamma_off.Rd:4: Lost br
...[truncated]...
L_{ik})
       |          ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |   ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |          ^
NOTE r-release-windows-x86_64

Rd files

checkRd: (-1) fd_term.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{theta_l}
       |     ^
checkRd: (-1) gamma_fd.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{gamma_l}
       |     ^
checkRd: (-1) gamma_off.Rd:4: Lost br
...[truncated]...
L_{ik})
       |          ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |   ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |          ^
NOTE r-oldrel-macos-arm64

Rd files

checkRd: (-1) fd_term.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{theta_l}
       |     ^
checkRd: (-1) gamma_fd.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{gamma_l}
       |     ^
checkRd: (-1) gamma_off.Rd:4: Lost br
...[truncated]...
L_{ik})
       |          ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |   ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |          ^
NOTE r-oldrel-macos-x86_64

Rd files

checkRd: (-1) fd_term.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{theta_l}
       |     ^
checkRd: (-1) gamma_fd.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{gamma_l}
       |     ^
checkRd: (-1) gamma_off.Rd:4: Lost br
...[truncated]...
L_{ik})
       |          ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |   ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |          ^
NOTE r-oldrel-windows-x86_64

Rd files

checkRd: (-1) fd_term.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{theta_l}
       |     ^
checkRd: (-1) gamma_fd.Rd:4: Lost braces; missing escapes or markup?
     4 | d/d_{gamma_l}
       |     ^
checkRd: (-1) gamma_off.Rd:4: Lost br
...[truncated]...
L_{ik})
       |          ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |   ^
checkRd: (-1) surv_right.Rd:4: Lost braces; missing escapes or markup?
     4 | S_{ik}(R_{ik})
       |          ^

Dependency Network

Dependencies Reverse dependencies bindata fastGHQuad CompQuadForm ICSKAT SIMICO

Version History

new 0.2.0 Mar 10, 2026
updated 0.2.0 ← 0.1.0 diff Nov 25, 2022
new 0.1.0 Nov 6, 2022