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SEERaBomb

SEER and Atomic Bomb Survivor Data Analysis Tools

v2019.2 · Dec 12, 2019 · GPL (>= 2)

Description

Creates SEER (Surveillance, Epidemiology and End Results) and A-bomb data binaries from ASCII sources and provides tools for estimating SEER second cancer risks. Methods are described in <doi:10.1038/leu.2015.258>.

Downloads

CRAN

381

Last 30 days

11414th

822

Last 90 days

3.2K

Last year

Trend: +81.4% (30d vs prior 30d)

r2u CRAN

24

Last 30 days

114

Last 90 days

401

Last year

Trend: -40% (30d vs prior 30d)

autoCRAN

2

Last 7 days

4

Last 30 days

0

All-time

autoCRAN-only: this name is served only by autoCRAN, so the count is exact.

CRAN Check Status

13 OK
Show all 13 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Jun 9, 2026
ERROR 12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Jun 8, 2026
ERROR r-devel-linux-x86_64-debian-gcc

package dependencies

Packages required but not available: 'demography', 'labelled'

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
OK 13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE May 2, 2026
ERROR 11 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Apr 25, 2026
ERROR r-release-macos-x86_64

package dependencies

Package required but not available: ‘labelled’

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Apr 22, 2026
ERROR 13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Apr 18, 2026
ERROR r-devel-windows-x86_64

whether package can be installed

Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.6/SEERaBomb.Rcheck/00install.out' for details.
OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Apr 10, 2026
ERROR 13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Apr 9, 2026
ERROR r-devel-linux-x86_64-debian-gcc

package dependencies

Package required but not available: ‘demography’

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Code intelligence has not been computed for this package yet.

Code

Structure

Lines of code

4,338

Files

186

Compiled share

1.9%

Has compiled src

Yes

Language breakdown

R 2,698 (62.2%)C/C++/src 82 (1.9%)Docs 1,558 (35.9%)

API

Exported functions

41

Internal functions

0

Testing & CI

Has tests

No

Test-to-code ratio

0.00

testthat edition

CI present

No

CI type

[]

PR gated

No

Docs

Return-value doc rate

\dontrun example ratio

67.5%

Roxygen coverage

Has pkgdown

No

NEWS present

Yes

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

0%

Unsafe pattern score

0

Dep constraint coverage

4.5%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

System requirements

C++ standard

License

GPL (>= 2)

License flags

SPDX valid, OSI approved

History

Versions

15

First release

2012-06-01

Latest release

2019-12-12

Avg cadence

210 days

Cold removal rate

100%

Dep drift

22

LOC over versions

v0.01.1: 556 LOCv0.2.1: 557 LOCv2013.4.0: 544 LOCv2013.4.1: 544 LOCv2013.4.3: 405 LOCv2014.4.1: 420 LOCv2015.1: 1,867 LOCv2015.2: 2,506 LOCv2016.1: 3,099 LOCv2016.2: 3,135 LOCv2017.1: 3,455 LOCv2017.2: 3,610 LOCv2018.1: 4,073 LOCv2019.1: 4,318 LOCv2019.2: 4,338 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/cran-code-metrics.

Dependency Network

Dependencies Reverse dependencies dplyr ggplot2 rgl demography Rcpp reshape2 mgcv tibble LaF DBI RSQLite openxlsx WriteXLS labelled scales +7 more dependencies SEERaBomb

Version History

16 tracked
new 2019.2 Mar 10, 2026
updated 2019.2 ← 2019.1 diff Dec 11, 2019
updated 2019.1 ← 2018.1 diff May 6, 2019
updated 2018.1 ← 2017.2 diff May 10, 2018
updated 2017.2 ← 2017.1 diff Aug 13, 2017
updated 2017.1 ← 2016.2 diff Apr 25, 2017
updated 2016.2 ← 2016.1 diff Nov 10, 2016
updated 2016.1 ← 2015.2 diff Apr 24, 2016
updated 2015.2 ← 2015.1 diff Sep 6, 2015
updated 2015.1 ← 2014.4.1 diff May 4, 2015
updated 2014.4.1 ← 2013.4.3 diff Apr 17, 2014
updated 2013.4.3 ← 2013.4.1 diff Dec 11, 2013
updated 2013.4.1 ← 2013.4.0 diff Apr 26, 2013
updated 2013.4.0 ← 0.2.1 diff Apr 25, 2013
updated 0.2.1 ← 0.01.1 diff Jun 25, 2012