SCINA
A Semi-Supervised Category Identification and Assignment Tool
v1.2.0
·
Jul 17, 2019
·
GPL-2
Description
An automatic cell type detection and assignment algorithm for single cell RNA-Seq and Cytof/FACS data. 'SCINA' is capable of assigning cell type identities to a pool of cells profiled by scRNA-Seq or Cytof/FACS data with prior knowledge of markers, such as genes and protein symbols that are highly or lowly expressed in each category. See Zhang Z, et al (2019) <doi:10.3390/genes10070531> for more details.
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CRAN Check Status
2
NOTE
12
OK
Show all 14 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | NOTE |
| r-devel-linux-x86_64-debian-gcc | NOTE |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-macos-arm64 | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | OK |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (2 non-OK)
NOTE
r-devel-linux-x86_64-debian-clang
CRAN incoming feasibility
Maintainer: ‘Ze Zhang <Ze.Zhang@utsouthwestern.edu>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Ze",
family = "Zhang",
role = c("aut", "cre"),
email = "ze.zhang@utsouthwestern.edu")
as necessary.
NOTE
r-devel-linux-x86_64-debian-gcc
CRAN incoming feasibility
Maintainer: ‘Ze Zhang <Ze.Zhang@utsouthwestern.edu>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Ze",
family = "Zhang",
role = c("aut", "cre"),
email = "ze.zhang@utsouthwestern.edu")
as necessary.
Check History
NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
NOTE
r-devel-linux-x86_64-debian-clang
CRAN incoming feasibility
Maintainer: ‘Ze Zhang <Ze.Zhang@utsouthwestern.edu>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Ze",
family = "Zhang",
role = c("aut", "cre"),
email = "ze.zhang@utsouthwestern.edu")
as necessary.
NOTE
r-devel-linux-x86_64-debian-gcc
CRAN incoming feasibility
Maintainer: ‘Ze Zhang <Ze.Zhang@utsouthwestern.edu>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Ze",
family = "Zhang",
role = c("aut", "cre"),
email = "ze.zhang@utsouthwestern.edu")
as necessary.